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EBI DbfetchID BC114006; SV 1; linear; mRNA; STD; MAM; 2775 BP. XX AC BC114006; XX DT 02-MAR-2006 (Rel. 87, Created) DT 16-FEB-2007 (Rel. 90, Last updated, Version 3) XX DE Bos taurus pipecolic acid oxidase, mRNA (cDNA clone MGC:137271 DE IMAGE:8013079), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-2775 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (27-FEB-2006) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000007946; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000010444; Bos_taurus. DR ImaGenes; IMAGp998H0517196Q. DR ImaGenes; IRAKp961E23262Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore CC cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo, L. Guan CC and Dr. S. Moore CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E, CC Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M, CC Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson CC R, Siddiqui A, Holt R, Jones SJ, Marra MA CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 262 Row: e Column: 23. XX FH Key Location/Qualifiers FH FT source 1..2775 FT /organism="Bos taurus" FT /lab_host="ElectroMAX DH10B" FT /strain="Hereford" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-05" FT /clone="MGC:137271 IMAGE:8013079" FT /tissue_type="Testis, 7 year old male, Hereford" FT /note="Vector: pCMV-SPORT6.0" FT /db_xref="taxon:9913" FT gene 1..2775 FT /gene="PIPOX" FT CDS 80..1258 FT /codon_start=1 FT /gene="PIPOX" FT /product="pipecolic acid oxidase" FT /db_xref="GOA:Q29RU9" FT /db_xref="InterPro:IPR006281" FT /db_xref="UniProtKB/Swiss-Prot:Q29RU9" FT /protein_id="AAI14007.1" FT /translation="MAAQRELYDAIVIGAGIQGCFTAYHLAKHSKKVLLLEQFFLPHSR FT GSSHGQSRIIRRAYPEDFYTQMMAECYSLWAQLEHEAGTQLYRQTGLLLLGMKENPELK FT IIQATLSRQGVEHQCLSSEELKQRFPNIRLARGEVGLLEVSGGVLYADKALRALQDGIR FT QLGGIVHDGEKVVEIKSGLPVMVKTTSRSYQAKSLIITAGPWTNRLLRPLGAELPLQTL FT RINVCYWQEKVPGSYSVSQAFPCFMGLGLSLAPHHIYGLPSREYPGLMKVCYHHGNNAD FT PEERDCPAAFSDIQDVHILSGFVRDHLPDLQPEPAVMEHCMYTNTPDGHFVLDRHPKYD FT NIVIGAGFSGHGFKLSPVVGKILYELSMKLTPSYDLTPFRISRFPSLGKAHL" XX SQ Sequence 2775 BP; 781 A; 664 C; 693 G; 637 T; 0 other; gagcctgcct ccgccggccc tctctggtct ctgaggtctg tgtggtctct gaggctgtag 60 ggctaattca gcgggcagga tggctgctca gagggagctc tatgacgcca ttgtgatcgg 120 ggcaggcatc cagggctgct tcacggcgta ccacctggcc aaacacagca agaaagtcct 180 cctgctggag cagttctttc tcccgcactc ccgaggaagc tcccatgggc agagccggat 240 catccgaagg gcatacccag aagatttcta cacccagatg atggctgagt gctactccct 300 gtgggcccag ctggagcatg aggcgggaac ccaattatac aggcagactg gactactgct 360 gctgggaatg aaggagaacc cagaattaaa gataatccag gctactttgt cgaggcaggg 420 agtggagcac cagtgtcttt catctgagga actgaagcaa cgtttcccca atattcggtt 480 ggccagggga gaagtggggc tcttggaggt gtccggagga gttctctatg ccgacaaggc 540 actcagagcc ctccaggatg gaattcgaca gctaggtggc atagtgcatg atggagagaa 600 ggtagtggag ataaaatcag ggctaccagt catggtgaaa actacctcca ggagctacca 660 agccaagagc ttgatcatca cggcaggtcc ttggaccaac cggctcctcc gtcccttggg 720 agctgagcta cctctccaga ccctgcggat caacgtgtgt tactggcaag agaaggttcc 780 tggaagctac agtgtgtccc aggcctttcc gtgtttcatg ggcctgggcc tcagcctggc 840 tcctcaccac atctacgggc tgccctccag agagtaccca gggctgatga aggtctgcta 900 tcaccacggc aacaatgcag atcccgagga gcgggactgc ccagcagctt tctcagacat 960 ccaagatgtc cacatcctga gcggttttgt cagagatcac ttacctgacc tgcagcccga 1020 gcctgctgtg atggagcatt gcatgtacac gaacaccccc gatgggcact tcgttcttga 1080 tagacaccca aagtacgaca acattgtcat tggtgctgga ttctctgggc atgggttcaa 1140 gttgtcccct gtcgtgggga agatcctgta cgaattaagc atgaaattaa cgccatccta 1200 tgacttgaca ccttttcgaa tcagccgctt tcccagcctg ggcaaagccc acctttgacc 1260 cccaggccag cagctcccct tctgtgccca ggagttggaa ataaagctgg gaaagacatg 1320 taagaggaag aaaaaggctg tgggaggcta tcctttcctc gtgactctct tcagtccccc 1380 ataaacaccg gctgattgaa cgtaccttct ttctctggcc aactccccaa tcacacacca 1440 cttttttgct tcagttcaat cagatattct acaatcacag agtgccaagg accttggagg 1500 tggatgtctc agtaaggaag gggcataagg accggctcag gagaccaaaa cagctattaa 1560 aattctcttc acgggggcat ttgttgaatt ttggatagat ctgatgaaag ttgcctaggg 1620 gagggtaaac aagatagtct gtagaccatt catgcccgtg gagctccttt tcataaaact 1680 agagccatcc tctatcacga acccccacaa aatgtggctc gtcgtgggtg cacagcaaat 1740 gtttgttgaa aaaaaaaaaa tgtgttgaac aaacagataa gtaaatgact gccttgcatg 1800 aaagcctgtg gcgggcttta ttttccatgt gaccttattt cttacagaat ttaattgtct 1860 gaattagcac cacagaatcc attaccccag gactccttag ggtctttatc ccctcaacgc 1920 accacaccct ctttctctgg attctttgtc tggttctctc ctctcataaa gacgctcggc 1980 tccccagtct ctcattaagg tgtattgtca ggtctttatg aagatggagc tgttctacca 2040 gaaaggaaga gagagacaca ctcgctcaga aaccctgttc aatgtttgaa tgttaaatgt 2100 gccattttat tatcattagg attgctccca cttaatgaaa cagcattaac accgagtcgg 2160 ctggcctcct tgcactaatt gctttggaag gaaacaggct cataactgcc ccagggtggg 2220 tggaggggtg agaggtgtaa acagagactc aagcaaggct gagcgcattc agatgaaacc 2280 gaagcaggag catctccaga caggggcccc ttggacccaa aagaatagga gttaatgagc 2340 tctggggaga aaaaaaaaaa aaaaaaaaac tgggactggg tgggctggaa atgttcagag 2400 gaatccctga ggggggagga gtgggaaatg agaaaaagag taaaaatatt ctcaaaggaa 2460 aaacaacaca gaggaaatta gtcttcaatt gccgcatagg cctaggcaca tggattaatg 2520 ctgatttctc ctgggaatta taaaagctag ccagttggaa tgaaacatca ttccaactct 2580 gcattttggg tgctctcatt tggttccctg agccacagcc tctgtaaagg ggcgggggag 2640 gataatcata tctgtaaaat gggaatatta aatctcatgg atcaatcttg aagacataat 2700 gctgaataaa atcatccaga cataaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2760 aaaaaaaaaa aaaaa 2775 // |
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