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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC113292; SV 1; linear; mRNA; STD; MAM; 1284 BP.
XX
AC   BC113292;
XX
DT   17-FEB-2006 (Rel. 86, Created)
DT   24-JAN-2007 (Rel. 90, Last updated, Version 5)
XX
DE   Bos taurus phosphatidic acid phosphatase type 2C, mRNA (cDNA clone
DE   MGC:138011 IMAGE:8086170), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1284
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (14-FEB-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000000717; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000000955; Bos_taurus.
DR   ImaGenes; IMAGp998M1617385Q.
DR   ImaGenes; IRAKp961J07264Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Lee Alexander, USDA, ARS, NPA
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E,
CC   Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M,
CC   Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson
CC   R, Siddiqui A, Holt R, Jones SJ, Marra MA
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 264 Row: j Column: 7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1284
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="L1 Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-16"
FT                   /clone="MGC:138011 IMAGE:8086170"
FT                   /tissue_type="Uterus, 8.5 month old female L1 Hereford"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:9913"
FT   gene            1..1284
FT                   /gene="PPAP2C"
FT   CDS             65..928
FT                   /codon_start=1
FT                   /gene="PPAP2C"
FT                   /product="phosphatidic acid phosphatase type 2C"
FT                   /db_xref="GOA:Q2HJ61"
FT                   /db_xref="InterPro:IPR000326"
FT                   /db_xref="InterPro:IPR016118"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q2HJ61"
FT                   /protein_id="AAI13293.1"
FT                   /translation="MERRWVFVLLDVLCVLVAALPCAILTFVNTPYKRGFYCGDDSIRY
FT                   PYRPDTITHGLMAGVIITATVILVSAGEAYLVYTDRLYSRSDFNNYLAALYKVVGTFLF
FT                   GAAVSQSLTDLAKYMTGRLRPNFLAVCDPDWSRVNCSAYVQVEVCRGSSANVTESRLSF
FT                   YSGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDHKHHWS
FT                   DVLVGLLQGALVASLTVRYISDFFKARPPQHCPEEEDLERKPSLSLTLALGETDCNHYG
FT                   YPVSSS"
XX
SQ   Sequence 1284 BP; 231 A; 382 C; 394 G; 277 T; 0 other;
     gtacgcgacg ggacgcggtg ggacgggcgc cgggggtcgc gggcgcggcc cgggcggggg        60
     cggcatggag cggaggtggg tcttcgtact gctcgacgtg ctgtgcgtgc tggtcgccgc       120
     tctgccctgc gccatcctga cgttcgtcaa cactccgtac aagcgaggtt tctactgtgg       180
     agatgactcc atccgatacc cctaccgtcc agacaccatc acccatgggc tcatggccgg       240
     ggtcatcatc acagccactg tcatccttgt gtcggctggg gaagcctacc tggtgtacac       300
     ggaccgcctc tactcccgct ctgatttcaa caactacctg gccgccctct acaaggtggt       360
     ggggacgttc ctgtttgggg cagcagtgag ccagtccctg acagacctgg ccaagtacat       420
     gaccggccgc ctgcggccca acttcctggc tgtgtgtgac cctgactgga gccgcgtcaa       480
     ctgctcggcg tatgtgcagg tggaggtgtg cagggggagc tctgctaacg tcacggagtc       540
     caggttgtcc ttctactccg gacactcctc ctttggcatg tactgcatgg tattcttggc       600
     gctctacgtg caggcccggc tctgctggaa gtgggcacgg ctgctgcggc ccaccgttca       660
     gttcttcctg gtagccttcg ccctgtacgt gggctacacc cgcgtttctg accacaaaca       720
     ccactggagt gacgttctcg tcggcctcct gcagggggcg ctggtggcca gcctcactgt       780
     ccggtacatc tccgacttct tcaaagctcg gcccccgcag cactgcccag aagaggagga       840
     cctggaacgg aagcccagcc tgtcgctgac gctggccctg ggcgagactg actgcaacca       900
     ctacgggtac cctgtgtctt cctcctgagg ccggagctgc atccagctgg ggctctggtg       960
     ggggcagcgt gtccatggtc ccggcaggcc cctcacttag catggtggtg agagccctgc      1020
     acaggcccca ggctggatcc tggcaggggc tccactaact ccaccttctg tgcactggac      1080
     caggggtctg aggatgcctg gggcagccct agcatttgga ggggaacgct tcctcggagc      1140
     ccccatcttt tgttggctta gggaagggac tgagagatcc tgacggatgc tgtttttgta      1200
     aaatgtaatg tatacgtgga tttttagtaa aatagggcat ttgcttgatg aatgttatca      1260
     aaaaaaaaaa aaaaaaaaaa aaaa                                             1284
//
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