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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC112654; SV 1; linear; mRNA; STD; MAM; 1776 BP.
XX
AC   BC112654;
XX
DT   08-FEB-2006 (Rel. 86, Created)
DT   20-APR-2007 (Rel. 91, Last updated, Version 6)
XX
DE   Bos taurus cysteinyl-tRNA synthetase 2, mitochondrial (putative), mRNA
DE   (cDNA clone MGC:137370 IMAGE:8019861), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1776
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (31-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000011471; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000015242; Bos_taurus.
DR   ImaGenes; IMAGp998B1917214Q.
DR   ImaGenes; IRAKp961J24262Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E,
CC   Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M,
CC   Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson
CC   R, Siddiqui A, Holt R, Jones SJ, Marra MA
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 262 Row: j Column: 24.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1776
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-05"
FT                   /clone="MGC:137370 IMAGE:8019861"
FT                   /tissue_type="Testis, 7 year old male, Hereford"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1776
FT                   /gene="CARS2"
FT   CDS             20..1687
FT                   /codon_start=1
FT                   /gene="CARS2"
FT                   /product="cysteinyl-tRNA synthetase 2, mitochondrial
FT                   (putative)"
FT                   /db_xref="GOA:Q2KIF8"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q2KIF8"
FT                   /protein_id="AAI12655.1"
FT                   /translation="MLWTRRACGGAWLLRAARGPEPGRSASGARGQGWLQPTGYDTGVK
FT                   VYNSLTRRKDPLIVSRADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILSRVFGCTV
FT                   VMVMGITDVDDKIIRRANEMSVSPASLARLYEEDFKQDMAALKVLPPTAYLRVTEHVPQ
FT                   IVAFIERLIANGHAYCTAKGNVYFDLQSRGDRYGKLVGVAPGPVGEPVDSDKRHTSDFA
FT                   LWKAAKPQEPFWGSPWGDGRPGWHIECSTIASLVFGSQLDIHSGGVDLAFPHHENEIAQ
FT                   CEAFHQCPQWGNYFLHSGHLHVKGGGEKMSKSLKNYVTIKDFLRSTSPDVFRLFCLRSS
FT                   YRSAIDYSEGALLEARSLLRATAAFVEDARAYLRGQLAGGPIQEDVLWERLGRTKAAVQ
FT                   AALADDFDTVRAVDAVMDLVHHGNRQLKAASEEPRGPRSPAVLGAVVASVEHFFETVGV
FT                   SLAERQCVPGAGSPAALYSLVEELVRFRLKVRQFALASGEAPGEARRQRLLERQPLLEA
FT                   CDALRRDLAVHGISIKDRSGSSTWELLDPRTEDPKPRS"
XX
SQ   Sequence 1776 BP; 327 A; 555 C; 609 G; 285 T; 0 other;
     ggggccttgc gcgccggcca tgctgtggac gcgccgggcc tgcgggggcg cttggctgct        60
     ccgggccgca cggggcccgg agccgggccg ctccgcgtcg ggggcgcgcg ggcagggctg       120
     gctgcagccc acgggctacg acacgggcgt caaggtgtac aacagcctca cccggaggaa       180
     ggacccgttg attgtgagcc gagcggacgc cgcctcctgg tacagctgcg gaccaacggt       240
     ctacgatcac gcacacctgg gtcatgcttg ctcctacgtc agatttgata taattcggag       300
     gatcctcagc agggtgttcg ggtgcaccgt cgtcatggtg atgggaatca cagacgtgga       360
     cgataagata atcagacgcg ccaacgagat gagcgtgtca cccgcgtccc tggcccgtct       420
     ttacgaagaa gacttcaaac aggacatggc ggccctgaag gtcctcccac ccactgccta       480
     cctgcgggtg accgagcacg tgcctcagat cgtcgccttc atcgagagac tcatcgccaa       540
     cgggcacgct tattgcacag caaaaggcaa cgtctacttt gacctgcagt cgcgaggcga       600
     caggtacggc aagctggttg gcgtggcacc tgggccggtt ggagagccag ttgactccga       660
     caagcggcac accagcgact tcgcactgtg gaaggcggcg aagccccagg agccgttctg       720
     gggctccccg tggggcgacg ggaggcccgg ctggcacatc gagtgttcca ccatcgccag       780
     tctggtattc ggaagtcagc tggacatcca ttcgggcggc gtggacctgg cgttcccaca       840
     ccatgagaac gagatcgccc agtgcgaggc cttccaccag tgcccgcagt gggggaacta       900
     cttcctgcac tccgggcacc tgcacgtgaa gggcggagga gagaagatgt ccaagtcgct       960
     gaagaactac gtcaccatca aggactttct ccgctccacc tctcccgacg tcttccggct      1020
     cttctgcctg cggagcagct acaggtcagc catcgactat agcgagggcg ccctgctgga      1080
     ggccaggagc ctgctgcggg ccacggccgc cttcgtggag gacgcgcggg catacttgag      1140
     agggcagctg gccggcgggc ccatccagga ggacgtgcta tgggagaggc tgggccgcac      1200
     caaggcggcc gtgcaggcgg ccttggcgga cgacttcgac acggtgcggg cagtggacgc      1260
     cgtcatggac cttgtccacc acgggaacag gcagctgaag gcggcctccg aggagccccg      1320
     cggtccccgg agccccgccg tgctgggagc cgtcgtggcc tccgtggagc acttctttga      1380
     gacggtgggc gtttctctgg ccgagcgaca gtgtgttcca ggggcgggca gcccggccgc      1440
     cctgtacagc ctggtggagg agctggtccg cttccggctg aaggtccgcc agttcgctct      1500
     ggcctccggg gaggcccctg gggaggcgcg gcggcagcgg ctcctggagc ggcagcctct      1560
     gctggaggcc tgcgacgcgc tacgcaggga cctggccgtc catggcatca gcatcaagga      1620
     caggagcggc tcgtccacat gggagctgct ggatccgagg acagaagacc ccaaacccag      1680
     gagctgagga cgggggaagc gaggccgtgg tctcctgcca cggttctgca ccctttaagt      1740
     cacagtaaag ccttcatgtg aaaaaaaaaa aaaaaa                                1776
//
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