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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC112535; SV 1; linear; mRNA; STD; MAM; 1712 BP.
XX
AC   BC112535;
XX
DT   03-FEB-2006 (Rel. 86, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 5)
XX
DE   Bos taurus L-threonine dehydrogenase, mRNA (cDNA clone MGC:137443
DE   IMAGE:8012014), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1712
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (31-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000000011; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000036775; Bos_taurus.
DR   ImaGenes; IMAGp998K2017193Q.
DR   ImaGenes; IRAKp961E08262Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 262 Row: e Column: 8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1712
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-05"
FT                   /clone="MGC:137443 IMAGE:8012014"
FT                   /tissue_type="Testis, 7 year old male, Hereford"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1712
FT                   /gene="TDH"
FT   CDS             105..1226
FT                   /codon_start=1
FT                   /gene="TDH"
FT                   /product="L-threonine dehydrogenase"
FT                   /db_xref="GOA:Q2KIR8"
FT                   /db_xref="InterPro:IPR001509"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q2KIR8"
FT                   /protein_id="AAI12536.1"
FT                   /translation="MPVVRVLRRVACWMLQSPACGCRAPVLPSRFLGTSPRQIPMDANF
FT                   HSTSFSEADQQRVLITGGLGQLGVGLASFLRKRFGKDNVILSDIRKPPEHVFLSGPFIY
FT                   SDILDYKNLREIVVNNRITWLFHYSALLSAVGEANVSLARAVNITGLHNVLDVAAEHGL
FT                   RLFVPSTIGAFGPTSPRNPTPDLCIQRPRTIYGVSKVHAELMGEYYYYRYGLDFRCLRY
FT                   PGIISADSQPGGGTTDYAVQIFHEAVKNGRFECNLKPDTRLPMMYIDDCLRATLEVMEA
FT                   PAESLSMRTYNISAMSFTPEELAQEVLKHVPELQVTYNVDPVRQAIADSWPMNFDDSNA
FT                   RKDWGWKHDFDLPELVTTMLNFHGSESRVAQAN"
XX
SQ   Sequence 1712 BP; 490 A; 410 C; 425 G; 387 T; 0 other;
     ggggctttct gctctgcgcg ctgtctctgt gccacgtgct tctccagcgc ctcagcggcg        60
     cagcatcttt gggcggctgt ctcggaaggt gtgccacaga gaccatgcca gttgttcggg       120
     tgctgcggcg ggtcgcctgc tggatgctgc agagcccagc ctgtggctgc cgggctcctg       180
     tcctacccag ccggtttctg gggacctctc ctcggcagat tccaatggat gccaacttcc       240
     actccacttc attctcagaa gcagaccagc agcgtgtctt aattacaggg ggtcttggcc       300
     agcttggagt gggtcttgct agctttctga ggaaacgatt tgggaaggac aatgtgattc       360
     tatctgacat tcggaagccc ccggaacacg tctttcttag tggcccgttt atttattccg       420
     acatcctgga ttacaagaat cttcgggaga ttgtggtgaa caaccgcatc acgtggctgt       480
     tccattacag cgccctgctc agcgcagtgg gagaagcaaa cgtgtccctg gccagagccg       540
     tgaacatcac tggactgcac aatgtcctgg acgttgccgc agagcacggt ctgcgattgt       600
     ttgtgccaag caccatcggg gcgtttggac ctacttctcc acggaaccca acccctgacc       660
     tctgcatcca gagacccagg accatctatg gggtgtccaa ggtccacgct gagcttatgg       720
     gcgagtatta ttattaccgg tatggattag actttcggtg cctgagatat cctggaatca       780
     tttctgctga ttcccagcct ggaggaggaa caactgacta tgcggtccag attttccatg       840
     aagctgtcaa gaatggcaga tttgagtgca acctgaaacc cgacacgagg ctcccaatga       900
     tgtacattga cgactgcctc cgggccaccc tggaggtcat ggaggcccca gcagagtccc       960
     tgtccatgag aacctacaac atcagcgcca tgagcttcac ccccgaggag ctggcccagg      1020
     aggtgctcaa gcatgtccca gagctccagg tcacctacaa tgtggatcct gtccgacagg      1080
     ccatagcgga tagttggcca atgaactttg atgatagcaa cgctcggaag gactggggat      1140
     ggaagcacga ttttgacctc ccagagctgg tgacaacgat gttgaacttc cacggttctg      1200
     agagcagagt tgcccaggct aactgaaggg gccggaggaa gagctcatga gtcctgggtg      1260
     gctgtccagg gaaagctata acaatcctga ggttccagac cccaaggaat ctagatgacg      1320
     tggggctgaa ggactaattg gattgaattt tcgcagctca tattgaactg ccacatgcag      1380
     aaatgacttg gctgtagcgt cttctcaatg ctgtaggttt ggtggtagcc cttctgaatc      1440
     tttgctgttt gcctaaactt gtccaaatca cagaatgaag acttaagtca caatcatttc      1500
     cgtttcctta attaagatga agtgaccact ttcgggaaga tatgtgacat ttctattaaa      1560
     ttaaacttaa tttaaatatc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1620
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1680
     aaaaaaaaaa aaaaagaaaa aaaaagaaaa aa                                    1712
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