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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC111287; SV 1; linear; mRNA; STD; MAM; 1149 BP.
XX
AC   BC111287;
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DT   11-JAN-2006 (Rel. 86, Created)
DT   19-MAR-2009 (Rel. 100, Last updated, Version 6)
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DE   Bos taurus glutathione peroxidase 8 (putative), mRNA (cDNA clone MGC:133953
DE   IMAGE:8059513), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
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RN   [1]
RC   NIH-MGC Project
RP   1-1149
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (07-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000021960; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000029279; Bos_taurus.
DR   ImaGenes; IMAGp998F2317317Q.
DR   ImaGenes; IRAKp961B02259Q.
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CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Y. Meng, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 259 Row: b Column: 2.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1149
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B"
FT                   /strain="Crossbred x Angus"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-04"
FT                   /clone="MGC:133953 IMAGE:8059513"
FT                   /tissue_type="Liver, 6 month old female calf, Crossbred x
FT                   Angus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1149
FT                   /gene="GPX8"
FT   CDS             25..654
FT                   /codon_start=1
FT                   /gene="GPX8"
FT                   /product="glutathione peroxidase 8 (putative)"
FT                   /db_xref="GOA:Q2NL01"
FT                   /db_xref="InterPro:IPR000889"
FT                   /db_xref="InterPro:IPR012335"
FT                   /db_xref="InterPro:IPR012336"
FT                   /db_xref="InterPro:IPR013376"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q2NL01"
FT                   /protein_id="AAI11288.1"
FT                   /translation="MEPLTAYPLRCSGPKAKAFAVLLSMVLCTVMLFLLQLKFLKPKIN
FT                   SFYTFEVKDANGRVVSLEKFKGKVALVVNVASDCQLTDRNYLALQELHKEFGPFHFSVL
FT                   AFPCNQFGESEPRPSKEVVSFARNNFGVTFPIFHKIKILGSEAEPAFRFLVDSSKKEPR
FT                   WNFWKYLVNPEGQVVKTWRPEEPIEVIRPEIAALIRQMIIKKKEDL"
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SQ   Sequence 1149 BP; 420 A; 208 C; 214 G; 307 T; 0 other;
     gactttcctc tagaatcatc caaaatggag cctctcacag cctacccttt gagatgttca        60
     gggcccaaag caaaggcatt tgcagtcttg ctgtctatgg ttctgtgcac agtaatgcta       120
     ttcctcctac aactcaaatt cctaaagcct aaaatcaaca gcttttatac ctttgaagtg       180
     aaagatgcaa atggaagggt ggtttctctg gaaaagttta aaggcaaagt tgcactagtt       240
     gtaaacgtgg ctagtgactg ccaactcaca gacagaaatt acttagcact gcaggaactg       300
     cacaaagagt ttggaccatt ccacttcagc gtcttggctt ttccatgcaa tcagtttgga       360
     gaatcggagc cccgcccgag caaggaagta gtatcttttg caagaaataa cttcggagta       420
     acattcccca tcttccacaa gattaagatt ctaggatccg aagcagaacc tgcatttaga       480
     tttcttgttg attcttcaaa gaaggaacca aggtggaact tttggaagta tctggtcaac       540
     cctgaaggtc aagttgtgaa gacctggagg ccagaggaac ccattgaagt catcaggcct       600
     gagatagcag ctctgattag acaaatgatt ataaaaaaga aagaggatct atgaaaatgc       660
     cattgaacca ttatatggca atagtcagaa tacaaaaatg tctccatggg ggtttggtcc       720
     ccttttaaat taactctgac aattaaatat ggaactgaag gataactttc cttttatgtt       780
     atcttgttag tgagtggtaa tgaatgtcca cagtatagat gttacctaaa gcaaaaataa       840
     acagcagcca acgactctag atgaaatata ttaaatactt catctgacca cactaaataa       900
     ttcagaatac caatgtgctt cagtatccta ttgtttcact tgacattttc taggattgta       960
     cgtgatggaa atgtcaacac actagaccac tgtttgaatt caagatactg tgtgacattt      1020
     ccagagtaac tgtaaatgat atttttatgt aatgaaaggc aaaataaaca ttgaaaatgt      1080
     gaaatataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aagaaaaaaa      1140
     aaaaaaaaa                                                              1149
//
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