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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC111185; SV 1; linear; mRNA; STD; MAM; 1216 BP.
XX
AC   BC111185;
XX
DT   10-DEC-2005 (Rel. 86, Created)
DT   27-JUN-2007 (Rel. 92, Last updated, Version 6)
XX
DE   Bos taurus ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast), mRNA
DE   (cDNA clone MGC:133997 IMAGE:8058434), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1216
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (07-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000015882; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000021109; Bos_taurus.
DR   ImaGenes; IMAGp998I2417314Q.
DR   ImaGenes; IRAKp961P11258Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Y. Meng, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 258 Row: p Column: 11.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1216
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B"
FT                   /strain="Crossbred x Angus"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-04"
FT                   /clone="MGC:133997 IMAGE:8058434"
FT                   /tissue_type="Liver, 6 month old female calf, Crossbred x
FT                   Angus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1216
FT                   /gene="UBE2J2"
FT   CDS             58..837
FT                   /codon_start=1
FT                   /gene="UBE2J2"
FT                   /product="ubiquitin-conjugating enzyme E2, J2 (UBC6
FT                   homolog, yeast)"
FT                   /db_xref="GOA:Q2TA03"
FT                   /db_xref="InterPro:IPR000608"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q2TA03"
FT                   /protein_id="AAI11186.1"
FT                   /translation="MSSNSVKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWH
FT                   YVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDT
FT                   WNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAAQSLVFNLKDKVFCELFPEV
FT                   VEEIKQKQKAQDELSSRPQALPLPDVVPDGETHHGQHGLPLLNGHAPGAGPHLAGLQQA
FT                   NRHHGLLGGALANLFVIVGFAAFAYTVKYVLRSIAQE"
XX
SQ   Sequence 1216 BP; 302 A; 324 C; 323 G; 267 T; 0 other;
     ggcggggccc ggcccggagc ttctgtgcgc ggaacccgag cttcttcaag gacacagatg        60
     agcagcaaca gcgttaagag agcaccgacg acagcgaccc agcgcctgaa gcaggactat       120
     ctccggatta agaaagaccc cgtgccttac atctgtgccg agcccctccc ttccaacatc       180
     cttgagtggc actatgtggt ccgaggccct gagatgactc cctatgaagg tggctattac       240
     cacggaaaac taatttttcc cagagaattt ccttttaaac ctcctagtat ttatatgata       300
     actcccaatg gaagatttaa gtgcaataca aggctgtgtc tttctatcac ggatttccac       360
     ccagacacgt ggaacccggc ctggtccgtc tccaccatcc tgacggggct cctgagcttt       420
     atggtggaga agggccccac cctgggcagc atcgagacat cggacttcac gaaaagacaa       480
     ctggctgcac aaagtttagt gtttaattta aaagacaaag tgttctgtga attatttcct       540
     gaagttgtgg aggaaattaa acaaaaacag aaagcacaag acgaactcag tagcagaccc       600
     caggctctcc ccttaccgga cgtggttcca gacggggaga cgcaccacgg ccagcacggg       660
     ctcccgctcc tcaatgggca cgcgccgggg gccgggccgc acctggcggg gctccagcag       720
     gccaaccggc accatggact tctgggcggg gccctggcga acttgtttgt tatagttggt       780
     tttgcggcct tcgcctacac ggtcaagtac gtgctgagga gcatagcgca ggagtgagct       840
     gccaccacga ccagcagagg ggtcggacac gcaggacgct gggcccgagc tcgacgtggg       900
     ctggctggac gtgctgctga gcactcaggc ctggctgact cctggggtta gctttttaaa       960
     aacctttaaa aggaaaacaa gaaccaaagc gtgtagtttg gatttggagg aaacgtgaga      1020
     tccccagccc ccatgctcgc cctggcatct ggcaggggct gaggggctcc atgtccacga      1080
     ggaggcctca cgctttggtt ttatagctta tctcccgtat tgtcttttgg acctgtttta      1140
     gtaacctgtt tttcatttta ttagatttgg tcacttaaaa atataaaact cgatgcctaa      1200
     aaaaaaaaaa aaaaaa                                                      1216
//
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