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EBI DbfetchID BC111175; SV 1; linear; mRNA; STD; MAM; 1566 BP. XX AC BC111175; XX DT 10-DEC-2005 (Rel. 86, Created) DT 24-JAN-2007 (Rel. 90, Last updated, Version 5) XX DE Bos taurus ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast), mRNA DE (cDNA clone MGC:134214 IMAGE:8054268), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-1566 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (07-DEC-2005) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000000590; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000004497; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000015202; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000015557; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000020796; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000039719; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000005897; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000008907; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000009882; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000020228; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000020696; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000027712; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000055368; Bos_taurus. DR ImaGenes; IMAGp998L1017303Q. DR ImaGenes; IRAKp961H05258Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: Y. Meng, M. Taniguchi, L. Guan and S. Moore CC cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo, L. Guan CC and Dr. S. Moore CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E, CC Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M, CC Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson CC R, Siddiqui A, Holt R, Jones SJ, Marra MA CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 258 Row: h Column: 5. XX FH Key Location/Qualifiers FH FT source 1..1566 FT /organism="Bos taurus" FT /lab_host="ElectroMAX DH10B" FT /strain="Crossbred x Angus" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-04" FT /clone="MGC:134214 IMAGE:8054268" FT /tissue_type="Liver, 6 month old female calf, Crossbred x FT Angus" FT /note="Vector: pCMV-SPORT6.0" FT /db_xref="taxon:9913" FT gene 1..1566 FT /gene="UBE2D1" FT CDS 252..695 FT /codon_start=1 FT /gene="UBE2D1" FT /product="ubiquitin-conjugating enzyme E2D 1 (UBC4/5 FT homolog, yeast)" FT /db_xref="GOA:Q2TA10" FT /db_xref="InterPro:IPR000608" FT /db_xref="InterPro:IPR016135" FT /db_xref="UniProtKB/Swiss-Prot:Q2TA10" FT /protein_id="AAI11176.1" FT /translation="MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAY FT QGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLL FT SICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM" XX SQ Sequence 1566 BP; 491 A; 325 C; 270 G; 480 T; 0 other; aggttccttc ccagaagcaa aagcggaaac aaaagagtct cgccggcgtc cccgcccgca 60 cactcgcaca ctagtgctcg ggcgcactcg gagcaggcac ccgcgcccag agctagctag 120 acagcagcga accggggacc catccggctg agccagccga gcagccggcg atccgagccc 180 gcactacccc acgcccccga gccctgcagc cgtgccccgc cggccggtgt ccccgctgcc 240 ctccctgacc gatggcgctg aagcggattc agaaagagtt aagtgatcta caacgtgacc 300 cacctgctca ctgttcggct ggacctgtgg gagatgactt gttccactgg caagcaacta 360 ttatggggcc tcctgatagc gcatatcaag gtggagtctt ctttctcact gtacattttc 420 cgacagacta tccttttaaa ccaccaaaga ttgctttcac aacaaaaatt taccatccaa 480 acataaacag taatggaagt atttgtcttg atatcctgag gtcacaatgg tcaccagctc 540 tgactgtgtc aaaagtttta ttgtccatat gttctctgct ttgtgaccct aatccagatg 600 atcccttagt accagatatt gctcaaatct ataaatcaga caaagaaaaa tacaacagac 660 acgcaagaga atggactcag aaatatgcaa tgtaaaatca aaaaaaattt catatatacc 720 agagtactgt aaaatctagg tttttttcaa cattagcagt aaattgagca ctgtttactg 780 tttcattgta ccatgaaatc ctgattttta cccattttaa atgtatttct gaagcaagac 840 aaaacaaact tccaaaaata ttcttgagac tgtgatgaga gcatttatca ttttgtatgc 900 attgagaaag acatttatta tggtttttaa gatacgtgga cgtctgcgtt ttcagcttac 960 aagatctaca atgcatctga aaagcaacca aattattttt tgctgaaact agatgttttt 1020 acatgaaaaa tactgtatgt gttatctaag atgttgtcag ttttataaat ctgtattcag 1080 atttcattct ttgttagctc actttataat ttgtattttt ttactgtata gactaaatat 1140 attctattta catgtatgtc aacttgttac ttttttcctg tgaacagtat tgaaaaaacc 1200 caacatctga taatgaaatg aattaactgt ctcccttgtc ttggggtatt ctgtagattg 1260 attgcagatt tcttaaacct gaaatgatct ttacactgta attctcagta tactgattat 1320 ggtaaaacgt tttgattttg ttatacttga cttaacttta ttacaatgtg aattaattgc 1380 actgctaagt agaaagctgt ataactttta tttgttgcta ttcacatctg aatttttttc 1440 tgtataggca atattatatt gacacctttt acagatctta atgtagcttt ttccatttaa 1500 ataaaatgct ttttctacta aaaaaaaaaa aaaaaaaaaa aaaaaaaaag aaaaaaaaaa 1560 aaaaaa 1566 // |
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