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EBI DbfetchID BC111000; SV 1; linear; mRNA; STD; HUM; 1630 BP. XX AC BC111000; XX DT 10-DEC-2005 (Rel. 86, Created) DT 16-OCT-2008 (Rel. 97, Last updated, Version 5) XX DE Homo sapiens chromosome 15 open reading frame 29, mRNA (cDNA clone DE MGC:117356 IMAGE:5751934), complete cds. XX KW MGC. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1630 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1630 RG NIH MGC Project RA ; RT ; RL Submitted (07-DEC-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSG00000134152; Homo_sapiens. DR Ensembl-Tr; ENST00000256544; Homo_sapiens. DR H-InvDB; HIT000339823. DR ImaGenes; IMAGp998E2312785Q. DR ImaGenes; IRAKp961N03233Q. DR ImaGenes; IRATp970A12110D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Life Technologies, Inc. CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: National Institutes of Health Intramural CC Sequencing Center (NISC), CC Gaithersburg, Maryland; CC Web site: http://www.nisc.nih.gov/ CC Contact: nisc_mgc@nhgri.nih.gov CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., CC Young,A., Zhang,L.-H. and Green,E.D. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 233 Row: n Column: 3 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 13376012. CC Differences found between this sequence and the human reference CC genome (build 36) are described in misc_difference features below. XX FH Key Location/Qualifiers FH FT source 1..1630 FT /organism="Homo sapiens" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_115" FT /clone="MGC:117356 IMAGE:5751934" FT /tissue_type="Brain, Lung, Testis, adult, pooled whole" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:9606" FT gene 1..1630 FT /gene="C15orf29" FT /note="synonym: FLJ22557" FT CDS 122..1036 FT /codon_start=1 FT /gene="C15orf29" FT /product="chromosome 15 open reading frame 29" FT /db_xref="HGNC:26199" FT /db_xref="UniProtKB/Swiss-Prot:Q9H079" FT /protein_id="AAI11001.1" FT /translation="MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPK FT QLAAYINRTVGQTVKSPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENEL FT ACAGHLPEKLHHDSRTYLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNM FT RLNVALTFWRKRSISELVAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPL FT VKSLLKSKFEEYVIVGLNWLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENH FT LTLVPGYTGNIAKDVDAYLLQLH" FT misc_difference 1107^1108 FT /gene="C15orf29" FT /note="1 base in the human genome, A, is not found in FT cDNA." FT misc_difference 1545 FT /gene="C15orf29" FT /note="'T' in cDNA is 'C' in the human genome." FT misc_difference 1564..1630 FT /gene="C15orf29" FT /note="polyA tail: 67 bases do not align to the human FT genome." XX SQ Sequence 1630 BP; 607 A; 262 C; 310 G; 451 T; 0 other; ggccctgagt gggactcggc ccagaagccg agggactctc taggctgccg ggcgctggtc 60 gtcagcgccg aggctgggct gaggcgccgc ggtaccatga ggcgccggta cttaagagat 120 tatggcatca gaaacccaca atgttaaaaa acggaacttt tgtaataaga ttgaggatca 180 tttcattgat cttcctagaa aaaagatctc taatttcact aataagaaca tgaaggaggt 240 taagaaatct ccaaaacagt tggctgctta cataaataga acagttggac aaactgtgaa 300 aagcccagat aaacttcgta aagtgatcta tcgcagaaag aaagttcatc atccctttcc 360 aaatccttgt tacagaaaaa aacagtcccc tggaagtggg ggctgtgaca tggcaaataa 420 agaaaatgaa ctggcttgtg caggccacct gcctgaaaaa ttacaccatg atagtcgaac 480 atatttggtt aactccagtg attctggttc ttcacagaca gaaagcccat catcaaaata 540 tagtgggttt ttttctgagg tttctcagga ccatgaaaca atggcccaag ttttgttcag 600 caggaatatg agattgaatg tagctttaac tttctggaga aagagaagta taagtgaact 660 tgtagcttat ttgttgagga tagaagatct tggcgttgtg gtagattgcc ttcctgtgct 720 caccaattgt ttacaggaag aaaaacaata tatctcactt ggctgctgtg ttgacttgtt 780 gcctctagta aagtcactac ttaaaagcaa atttgaagaa tatgttatag ttggtttaaa 840 ctggcttcaa gcagtcatta aaaggtggtg gtcagaacta tcatccaaaa cagaaattat 900 aaatgatgga aatattcaaa ttttaaaaca acaattaagt ggattatggg aacaggaaaa 960 ccatcttact ttggttccag gatatactgg taatatagct aaggatgtag atgcttattt 1020 attacagtta cattgagaga tttcatctac taaagagcat ttggtttttc aaaacatccc 1080 tgaactgtat aatttacaaa aaaaaaagtc tcgtctgaga actgtgaact gtggaagaaa 1140 tcaaaactat tttttctttt aaaaagccac gtaatgaaac cactaatgaa atcccagcaa 1200 tctgcttcac attgaagtgg aaaaatatcc aaaaggagca gcttcaattt cattgaggtg 1260 aaagtgcact atgaagattg ttcacctttg ctgcatttgg gagttatatg gttatttggt 1320 aacattaaga actactggat tttaatgcaa tcctgcataa aaatataatt tatactatgt 1380 gaaaaaataa gacaggactt accactagga accaccaaga ccaatcatca ttaacttttt 1440 taagattgtg ttttattaaa aaaaaaaaac acttaaatgt gtgcagctat tttcttatgt 1500 tgaaaagact gaaagtttaa aacatgaaaa aaatcaatat taaatatttt ttgttcacac 1560 tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1620 aaaaaaaaaa 1630 // |
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