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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC109701; SV 1; linear; mRNA; STD; MAM; 1207 BP.
XX
AC   BC109701;
XX
DT   11-NOV-2005 (Rel. 85, Created)
DT   16-FEB-2007 (Rel. 90, Last updated, Version 7)
XX
DE   Bos taurus phosphatidylinositol glycan anchor biosynthesis, class H, mRNA
DE   (cDNA clone MGC:134190 IMAGE:8061310), complete cds.
XX
KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1207
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (09-NOV-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000018299; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000024352; Bos_taurus.
DR   ImaGenes; IMAGp998A2017322Q.
DR   ImaGenes; IRAKp961E13259Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Y. Meng, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E,
CC   Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M,
CC   Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson
CC   R, Siddiqui A, Holt R, Jones SJ, Marra MA
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 259 Row: e Column: 13.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1207
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B"
FT                   /strain="Crossbred x Angus"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-04"
FT                   /clone="MGC:134190 IMAGE:8061310"
FT                   /tissue_type="Liver, 6 month old female calf, Crossbred x
FT                   Angus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1207
FT                   /gene="PIGH"
FT   CDS             71..637
FT                   /codon_start=1
FT                   /gene="PIGH"
FT                   /product="phosphatidylinositol glycan anchor biosynthesis,
FT                   class H"
FT                   /db_xref="GOA:Q32L89"
FT                   /db_xref="InterPro:IPR019328"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q32L89"
FT                   /protein_id="AAI09702.1"
FT                   /translation="MEDERSLSDICGGRLALHRRYYSPSCLEFCLSCPRISLRSITAVT
FT                   CTVWLAAYGLFTLCENSMILSAAIFITLLGLLGYLHFVKIDHETLLIIDSLGIQMTSSY
FT                   ASGKESTTFIEMGKVKDVIINEAIYMQKVIYYLCILLKDPVEPHGISQVVPIFQSAKPR
FT                   LDCLIEVYRSCQEILAHQKAASTSP"
XX
SQ   Sequence 1207 BP; 319 A; 275 C; 286 G; 327 T; 0 other;
     gagcgagagg acgctggagg gcgcgctaga gcggcgaggc atggccgggc ctggggcggg        60
     cgagccggcc atggaggacg agcgaagctt atcagatatc tgcggcggcc gcctggcctt       120
     gcaccgccga tactactccc cttcctgcct ggagttctgc ctcagctgcc ctcggatctc       180
     tttgcgctcg atcaccgctg tcacctgcac cgtgtggctg gcggcctacg gactcttcac       240
     actctgtgag aacagcatga tcctctctgc tgccatcttc atcactctct taggcctgct       300
     tggttacctc cattttgtaa agattgatca tgagactctg ttaatcattg attccctggg       360
     tatccagatg acctcatcct atgcctcagg caaagaaagt accaccttca ttgagatggg       420
     caaggtgaag gatgtcatca ttaatgaggc tatttacatg cagaaggtga tttactacct       480
     ctgcatttta ttgaaggatc cagtggaacc acatgggata tcccaagtag tacccatctt       540
     ccagagtgcc aagccccggc tggactgctt gattgaagtg tacaggagct gccaggagat       600
     cctggcacac cagaaagctg catcaacgag cccatgagtc ccagcattca gaaagccagt       660
     attgtcttcc agaggagact cctaagccac agtggttggc ttattttctg tattttaaac       720
     cttcaagtgg acatagtctg agaaaccagt atggatgtgg tggatctcag agccatagag       780
     aaggtgactg aaaacctaac ttattgtgtg atattgagca aagtattaat gtatatttta       840
     gtgttccttt tgtaaggttt tatttatttt accaattgag gggagacctt gaaactctat       900
     gttaggagta atgctgacta agcgcacttt gtgagcacac ttgggcttac tttttgttgg       960
     aatttataga aaatgggaaa ctgacatcag ctcttttgat aaagataatt ttccaactgt      1020
     gcagtgtccc tgtataaaag ttagaaagaa aaaaagcaag cccttcaggg actggtcagt      1080
     aggaagcaat gtcctacaaa agtctagtct ctctccacct agctcctgtg ttctgtacag      1140
     ggttacttta tgatgattct cttaataaac agatattctt ccaagacata caaaaaaaaa      1200
     aaaaaaa                                                                1207
//
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