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EBI DbfetchID BC108481; SV 1; linear; mRNA; STD; VRT; 1616 BP. XX AC BC108481; XX DT 05-NOV-2005 (Rel. 85, Created) DT 19-MAR-2009 (Rel. 100, Last updated, Version 5) XX DE Xenopus laevis glycerol-3-phosphate dehydrogenase 1-like protein, mRNA DE (cDNA clone MGC:130781 IMAGE:7980692), complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-1616 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1616 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1616 RA Klein S., Gerhard D.S.; RT ; RL Submitted (03-NOV-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998B1817112Q. DR ImaGenes; IRAKp961K24254Q. DR ImaGenes; IRBHp990E0168D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Igor Dawid CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 254 Row: k Column: 24 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 29126821. XX FH Key Location/Qualifiers FH FT source 1..1616 FT /organism="Xenopus laevis" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Emb10" FT /clone="MGC:130781 IMAGE:7980692" FT /tissue_type="Embryo, neurula stage" FT /note="Vector: pExpress1" FT /db_xref="taxon:8355" FT gene 1..1616 FT /gene="kiaa0089" FT /gene_synonym="gpd1l" FT CDS 84..1142 FT /codon_start=1 FT /gene="kiaa0089" FT /gene_synonym="gpd1l" FT /product="kiaa0089 protein" FT /db_xref="GOA:Q801R8" FT /db_xref="HSSP:1X0X" FT /db_xref="InterPro:IPR006109" FT /db_xref="InterPro:IPR006168" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR011128" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017751" FT /db_xref="UniProtKB/Swiss-Prot:Q801R8" FT /protein_id="AAI08482.1" FT /translation="MALAGPLKVCIVGSGNWGSAVAKIIGHNVKNMKKFASTVNMWVFE FT ENINGRKLTEIINTEHENVKYLPGHKLPENVVALPNLTDAVRDADLLIFVIPHQFIHKV FT CQEISGKVHKNALGITLIKGIDEGPEGLRLISDIIREKMNIDVSVLMGANIANEVAAEK FT FCETTIGSKNKNHGLLFKELLQTPNFRITVVEDADTVELCGALKNIVAVAAGFCDGLSC FT GDNTKAAVIRLGLMEMIAFANVFCKDSVSIATFLESCGVADLITTCYGGRNRKVAEAFV FT KTGKSIEELEKEMLNGQKLQGPQTSAEVYRILQQKNMVNNFPLFTAVFQICYEGKPVED FT VISCLQSHPEHM" XX SQ Sequence 1616 BP; 509 A; 326 C; 340 G; 441 T; 0 other; gaagagacgg ctagtcccag cgccagccca cagtctctcc aacagcccag tccttcctgc 60 agcatctcga cactctctga atcatggcgc tcgccggacc cctcaaagtg tgcatagtgg 120 gctcggggaa ctggggttct gcggttgcca aaattatagg tcacaatgtt aaaaatatga 180 agaaattcgc atccacggtc aatatgtggg tttttgaaga aaacatcaat ggacggaaac 240 taacagagat cattaataca gaacatgaga atgtgaaata tctccccggg cacaagctac 300 cagagaatgt ggttgctctt ccaaacctca ccgatgcagt cagagatgct gaccttctca 360 tttttgtcat tccacaccaa tttatacata aagtttgcca agagatttct gggaaggtcc 420 acaagaacgc acttgggata acactcataa agggcattga tgaaggacca gaaggcctgc 480 gtcttatttc cgatattatc cgtgaaaaaa tgaatattga cgtgagtgtg ctgatggggg 540 caaacattgc aaatgaagtg gcagcagaga aattctgtga gacaacaata ggcagcaaaa 600 acaagaatca cggcctgcta tttaaagagc tcctgcagac tccaaatttc agaataactg 660 tggtagagga tgctgataca gtggaacttt gtggagcttt aaagaatatt gtggcagtgg 720 ctgctggatt ttgcgatggc ctcagctgtg gagacaacac caaagctgct gttatccgtc 780 ttgggctgat ggagatgatc gcgtttgcca atgttttctg caaggactct gtatctatag 840 ccacattttt agagagctgt ggagttgcag atcttatcac tacatgttac ggcgggcgca 900 atcgaaaggt ggctgaggcg tttgtaaaaa caggaaagag catcgaagag ttggaaaaag 960 aaatgttgaa tgggcagaag ttacaagggc ctcaaacatc tgcagaagtt taccgtatcc 1020 tgcagcagaa gaacatggta aacaacttcc cgctcttcac tgctgtcttt cagatctgct 1080 atgaaggcaa acctgtggaa gatgtcattt catgtctgca gagccacccg gagcacatgt 1140 agctctgaac cttggttcat ggatcatgtt tcttttgctt ctagatattt gaaaactctg 1200 gaatgcaata ttcacccaac gcacaagcca cggatgtggc taagtattaa atcacaaata 1260 cacactccac tactgatcaa taatacattt ctggtcaaaa gacatcaaaa accatgctgc 1320 ctaaagaaaa taatcagatt tttatctttt tttttaacag atcatgccac attttgtctt 1380 tcttaagatt aaaatgagca taaacacagt actgtagcaa gctgtaatca aataataatc 1440 agctgtacgc tgttaataaa actgcaaagt attgatatca aatgttttta acagcagttc 1500 ctggttaaca tatcagcctc ctatttggca ttactgtttt ttcatttgat ttttttttta 1560 tctgtgcaca ttaaaacaat ttattttttt ttaaaaaaaa aaaaaaaaaa aaaaaa 1616 // |
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