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EBI DbfetchID BC105628; SV 1; linear; mRNA; STD; ROD; 1312 BP. XX AC BC105628; XX DT 14-SEP-2006 (Rel. 89, Created) DT 22-SEP-2006 (Rel. 89, Last updated, Version 2) XX DE Rattus norvegicus agmatine ureohydrolase (agmatinase), mRNA (cDNA clone DE MGC:125053 IMAGE:7322772), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-1312 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1312 RG NIH MGC Project RA ; RT ; RL Submitted (26-SEP-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000005511. DR Ensembl-Gn; ENSRNOG00000012315; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000016648; Rattus_norvegicus. DR ImaGenes; IMAGp998M1015388Q. DR ImaGenes; IRAKp961F13244Q. DR ImaGenes; IRBPp993G1250D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Drs. Josef Lazar & Howard Jacob, Medical CC College of Wisconsin CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: National Institutes of Health Intramural CC Sequencing Center (NISC), CC Gaithersburg, Maryland; CC Web site: http://www.nisc.nih.gov/ CC Contact: nisc_mgc@nhgri.nih.gov CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., CC Young,A., Zhang,L.-H. and Green,E.D. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 244 Row: f Column: 13. XX FH Key Location/Qualifiers FH FT source 1..1312 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_247" FT /clone="MGC:125053 IMAGE:7322772" FT /tissue_type="Liver, rat" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..1312 FT /gene="Agmat" FT CDS 15..1076 FT /codon_start=1 FT /gene="Agmat" FT /product="agmatine ureohydrolase (agmatinase)" FT /db_xref="GOA:Q0D2L3" FT /db_xref="InterPro:IPR005924" FT /db_xref="InterPro:IPR005925" FT /db_xref="InterPro:IPR006035" FT /db_xref="UniProtKB/Swiss-Prot:Q0D2L3" FT /protein_id="AAI05629.1" FT /translation="MLQLLKSSWVRSAGSGVVTWRASAGLFCPGTRQASDTSDTLHHPS FT PSSESQVQPVRVCSMMHLPLQSSPEGLDAAFVGVPLDTGTSNRPGARFGPRRIREESLM FT LGTVNPSTGALPFQSLRVADLGNVNVNLYNLQDSCRLIREAYQNILATGCIPLTLGGDH FT TITYPILQAVAKEHGPVGLVHVGAHSNTSDKPLEDKVYHRTPFRRSVDEGLLDSKRVVQ FT IGIRGSSRTLDPYRYSRSQGFRVVLAEDCWMKSLVPLMAEIRQQMGGVPLYISFAIDAL FT DPAYAPGTGTPEIAGLTPSQALEIIRGCQGLNVVGCDLVEVSPPYDLSGNTALLAANLL FT FEMLCALPKVTTV" XX SQ Sequence 1312 BP; 309 A; 368 C; 351 G; 284 T; 0 other; cctcaatagg cggcatgctg cagctgctga agtccagctg ggtccggagt gcggggtctg 60 gggtggtcac gtggcgtgcc tctgcggggc tcttctgtcc tgggacccgc caggcttcag 120 atacctcaga taccctacat cacccgtccc ctagctctga gtcacaggta cagccggtac 180 gcgtctgttc catgatgcac ttgcccctgc agtcctcccc cgaggggctg gatgctgctt 240 tcgtcggtgt gcctctggat accggaactt ccaaccggcc cggggcaaga tttggacccc 300 gtcgcatccg ggaggagtca ctgatgctgg ggactgtcaa tcccagcacg ggagccctcc 360 ccttccagtc cctcagggtt gcagacctag gcaatgtgaa cgtcaatctc tacaaccttc 420 aggacagctg ccggctaatc cgagaggcct atcagaacat cctagcaact ggctgcattc 480 ctctgacctt gggtggagac cataccatca catatcccat actgcaagcc gtggcaaaag 540 agcatggccc tgtgggttta gtgcatgtgg gtgcccacag caacacctcg gacaaacctc 600 tggaggacaa ggtctaccat cggacacctt tccgccgaag tgtggatgag ggactgctgg 660 acagcaagcg agtggtacag ataggtatcc ggggctcctc caggaccctg gatccctaca 720 gatacagtcg gagccagggc ttccgtgtgg tcctggctga agactgttgg atgaagtcac 780 tggtccccct gatggcagag atcaggcagc agatgggggg tgtgcctctt tacatcagct 840 ttgccataga tgccttggat cctgcctatg ccccagggac agggacacca gaaattgctg 900 ggctcacccc tagtcaggct ctggagatca tccggggctg tcaaggcctg aatgtggtgg 960 gctgtgacct tgtggaagtt tccccgccgt atgatctctc tggaaacaca gccctcctcg 1020 cggctaacct actgtttgag atgctgtgtg ctctccccaa ggtgacaact gtctgagtca 1080 gtgttcctga agttgaaaca gactgggtca tgatgaagcc tcaaggccct gtgaacgaac 1140 tgtggctagg atcaaagaac ccctcctgtg aggtgtcacc acaaacaagg gcaattcaga 1200 gcattacccc gaacagctcg aacagctcgt gtctctttcc ttcctaacat taaaacattt 1260 atttaatttt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa 1312 // |
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