 |
|
EBI DbfetchID BC105358; SV 1; linear; mRNA; STD; MAM; 2816 BP. XX AC BC105358; XX DT 08-FEB-2006 (Rel. 86, Created) DT 24-JAN-2007 (Rel. 90, Last updated, Version 5) XX DE Bos taurus asparaginyl-tRNA synthetase, mRNA (cDNA clone MGC:127700 DE IMAGE:7955301), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-2816 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (20-SEP-2005) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000012297; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000019271; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000016311; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000025659; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000045573; Bos_taurus. DR ImaGenes; IMAGp998D1916571Q. DR ImaGenes; IRAKp961D13242Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore, CC University of Alberta CC cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo, L. Guan CC and Dr. S. Moore CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E, CC Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M, CC Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson CC R, Siddiqui A, Holt R, Jones SJ, Marra MA CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 242 Row: d Column: 13. XX FH Key Location/Qualifiers FH FT source 1..2816 FT /organism="Bos taurus" FT /lab_host="XL10-Gold" FT /strain="Crossbred x Angus" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-02" FT /clone="MGC:127700 IMAGE:7955301" FT /tissue_type="Ileum, crossbred X Angus female calf, 6 FT months old." FT /note="Vector: pCMV-SPORT6.0" FT /db_xref="taxon:9913" FT gene 1..2816 FT /gene="NARS" FT CDS 77..1756 FT /codon_start=1 FT /gene="NARS" FT /product="asparaginyl-tRNA synthetase" FT /db_xref="GOA:Q2KJG3" FT /db_xref="HSSP:1X56" FT /db_xref="InterPro:IPR002312" FT /db_xref="InterPro:IPR004364" FT /db_xref="InterPro:IPR004365" FT /db_xref="InterPro:IPR004522" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018150" FT /db_xref="UniProtKB/Swiss-Prot:Q2KJG3" FT /protein_id="AAI05359.1" FT /translation="MSLEVVRAAAGMVLAELYVSDREGNDVTGDGTKEKPFKTGLKALM FT TVGKEPFPTIYVDSQKENERWDVISKSQMKNIRKLWHREQMKSESREKKEAEDNLRREK FT NLEEAKKITIKNDPSLPEPKCVKIRELKGYRGQRIKVFGWVHRLRRQGKNLMFLVLRDG FT TGFLQCVLSDDLCQCYNGVVLSTESSVAVYGVLNLTPKGKQAPGGHELSCDFWELIGLA FT PAGGADNLINEESDVDVQLNNRHMMIRGENMSKILKARSVITRCFRDHFFDRGYHEITP FT PTLVQTQVEGGATLFKLDYFGEEAYLTQSSQLYLETCIPALGDVFCIAQSYRAEQSRTR FT RHLAEYTHVEAECPFLTFEELLNRLEDLVCDVVDRVLKSPAGNIVRDLNPNFKPPKRPF FT KRMNYSDAIVWLKEHNIKKEDGTFYEFGEDIPEAPERLMTDTINEPILLCRFPVEIKSF FT YMQRCPEDPRLTESVDVLMPNVGEIVGGSMRIWDNEEILAGYKREGIDPTPYYWYTDQR FT KYGTCPHGGYGLGLERFLTWILDRYHIRDVCLYPRFVQRCKP" XX SQ Sequence 2816 BP; 813 A; 606 C; 684 G; 713 T; 0 other; ggatgatgca atcttcgtgt tgaggaggct gccggcgcgc tccgcgggga ggctaggtgg 60 ctgcgtgttg gcggcgatgt ccttggaggt ggtcagggcg gccgcaggga tggtgctcgc 120 agaactgtat gtctccgacc gagagggaaa tgatgttact ggtgatggaa ccaaggagaa 180 accttttaaa acaggcctta aggctttgat gacagttgga aaagaaccct ttcctaccat 240 ttacgtagat tcacaaaaag aaaatgagag gtgggatgtt atttctaagt cccagatgaa 300 gaacattagg aagctgtggc acagggagca gatgaagagt gagtcccggg agaagaaaga 360 ggcagaagac aatttgcgaa gagagaagaa cctggaagaa gcaaagaaga ttaccattaa 420 aaatgaccca agtcttccag agccgaaatg tgtgaagatt cgggaactaa aaggatacag 480 aggccaaagg ataaaggtgt ttggctgggt ccacaggctg cgtaggcaag gaaagaattt 540 aatgtttctg gtgttgcggg acggtacggg ttttctccag tgtgtcctgt cagatgatct 600 gtgtcagtgt tacaatggcg ttgtcttgtc cactgagagc agtgttgcag tgtatggagt 660 gctgaatctt accccaaagg gcaagcaggc tccggggggc cacgagctga gctgcgactt 720 ctgggagctg atcgggttgg cccccgccgg aggtgctgac aacttgatca acgaggagtc 780 cgacgtggac gtccagctca acaacagaca catgatgatc cgcggggaga acatgtccaa 840 aatcctgaag gcgcgctccg tcatcaccag gtgcttcaga gaccacttct tcgacagggg 900 gtaccacgaa atcactcctc caacgttggt gcaaacacag gtggaaggcg gcgccacgct 960 cttcaagctc gactattttg gggaagaggc gtatctgacg cagtcctctc agctctacct 1020 ggagacctgc attccagctc tgggggacgt cttttgcatc gcacagtcat acagggcaga 1080 acagtccaga acacgaaggc acctggctga atacactcac gtggaagccg agtgtccttt 1140 cctgaccttc gaggagctcc tgaaccgcct ggaggacttg gtgtgtgacg tggttgatag 1200 agtcctgaaa tcacccgcag gaaacatagt gcgcgacctc aacccgaatt ttaagccccc 1260 taaacggcct ttcaaacgga tgaactattc agatgcgatt gtgtggctga aagaacacaa 1320 tataaagaaa gaagacggaa ctttctatga atttggagag gacatcccgg aagctccaga 1380 gagactgatg acggacacca tcaacgagcc catcttgctg tgtcgctttc ccgtggagat 1440 caagtccttc tacatgcagc gctgtcccga ggacccccgg ctcaccgaat ctgtcgacgt 1500 gttgatgccc aatgttggtg agatcgtggg tggctccatg cgtatctggg ataatgaaga 1560 gatcctggca ggttacaaaa gagaagggat tgatcccact ccctattact ggtacacgga 1620 tcagagaaaa tatggcacgt gtccacatgg cggctatggc ctgggcttgg aacgattctt 1680 aacctggatt ctggacagat accacatccg agatgtgtgt ttgtaccctc ggtttgtcca 1740 gcgctgcaag ccatgatcgg tccccccaac ccccagagct ttaaggagag aacacggttc 1800 atggaaggaa cagactgcct cttaaaaaaa aaaagaagcc aaaatcttcc ccccgctttt 1860 ttttttttaa ttccactggg gtatgtccgt ttctgttttc tcttttttat tcctgctacc 1920 acagaaagca gttcaaaaca ttttgaatat caagtaacat tgatgttatc attttaagga 1980 aaaaataccc attacaaagt ttgggagaaa ctgtagcatg tagctttgca gttaggagta 2040 tgtctcagcg ctttatccac ctttaggtta caatctttat gttgtatata ccacatatat 2100 cattaaataa ttttaaatta tgatctgaga cattccagta atttaatctc tctgtccttt 2160 taagtataaa tggaattctt ttaatttcta ccactttatc gtatcaatga gttcaacacc 2220 ttggagaaaa attgacaata tgctgtaaaa atctgctagt attagaacag agcctaaatc 2280 agtagataca ggaatgatat gactacaatc ttttgcatcc gttgtgaatc tttcctaaat 2340 ctcatagctg cttataactc taaagcatac aaattggtgt ggaggaattt gtgaaaatgg 2400 aattacctta aacagttgga agtgacagca agttttttgg cacatcagtg aacagctttc 2460 tttctcggat tagtttaaag aggcagggtg atctctctct cctggtagtt ccacagtaat 2520 tcagaacaga gaagttccca aagcatttgc agctggcatc ttaaggacag ccgtccgtgg 2580 tggttggtgt caccccacat actgtgtctt tagatctaat ttctcctacc ttattaactc 2640 tcatacttac tgaatggctt cctttcgggt ttggttaatt tctcccctca aatgcatgtc 2700 agtgtattct cagtaacctc tattcccagc aatcaataaa tggacacgtg taaaaactca 2760 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa 2816 // |
|