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EBI DbfetchID BC105335; SV 1; linear; mRNA; STD; MAM; 2322 BP. XX AC BC105335; XX DT 08-FEB-2006 (Rel. 86, Created) DT 24-JAN-2007 (Rel. 90, Last updated, Version 5) XX DE Bos taurus aldehyde dehydrogenase 9 family, member A1, mRNA (cDNA clone DE MGC:127331 IMAGE:7947148), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-2322 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (20-SEP-2005) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000017852; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000034095; Bos_taurus. DR ImaGenes; IMAGp998A0216550Q. DR ImaGenes; IRAKp961B07241Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore, CC University of Alberta CC cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo, L. Guan CC and Dr. S. Moore CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E, CC Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M, CC Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson CC R, Siddiqui A, Holt R, Jones SJ, Marra MA CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 241 Row: b Column: 7. XX FH Key Location/Qualifiers FH FT source 1..2322 FT /organism="Bos taurus" FT /lab_host="XL10-Gold" FT /strain="Crossbred x Angus" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-02" FT /clone="MGC:127331 IMAGE:7947148" FT /tissue_type="Ileum, crossbred X Angus female calf, 6 FT months old." FT /note="Vector: pCMV-SPORT6.0" FT /db_xref="taxon:9913" FT gene 1..2322 FT /gene="ALDH9A1" FT CDS 86..1570 FT /codon_start=1 FT /gene="ALDH9A1" FT /product="aldehyde dehydrogenase 9 family, member A1" FT /db_xref="GOA:Q2KJH9" FT /db_xref="InterPro:IPR015590" FT /db_xref="UniProtKB/Swiss-Prot:Q2KJH9" FT /protein_id="AAI05336.1" FT /translation="MSTGTFVVSQPLNYRGGARVEPVDASGTEKAFEPASGRVIATFTC FT SGEKEVNLAVQDAKAAFKIWSQKSGMERCRILLEAARIIRERRDEIATMETINNGKSIF FT EARWDIDTSWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIA FT CWKSAPALACGNAMVFKPSPFTPVSVLLLAEIYTEAGVPPGLFNVVQGGAATGQFLCQH FT RDVAKVSFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMKNAVKGALMANF FT LTQGEVCCNGTRVFVQKEILDQFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERVL FT GFVKVAKEQGAKVLCGGDVFVPEDPKLKDGYYMRPCVLTNCRDDMTCVKEEIFGPVMSI FT LSFDTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFINNYNVSPVELPFG FT GYKKSGFGRENGRVTIEYYSQLKTVCVEMGDVESAF" XX SQ Sequence 2322 BP; 629 A; 506 C; 622 G; 565 T; 0 other; ttctcccatg tttctccgag ctggcctggc tgcactgtgt acgctttccc gcaccctcag 60 gccagcttct gctcggatcg ccgccatgag cactggcacc ttcgtcgtgt cgcagccgct 120 caattaccgt ggcggggccc gcgtggaacc agtggatgcc tccggcaccg agaaggcttt 180 cgagccagca tccggtaggg tgatagctac tttcacatgt tcaggagaaa aggaagtaaa 240 tttggctgtt caggatgcaa aggctgcctt taaaatatgg agtcaaaaat ctggcatgga 300 gcgttgccga atccttttgg aggctgccag gataataagg gaacggaggg atgaaattgc 360 cactatggag actatcaaca atgggaagtc catctttgag gcccgctggg acattgacac 420 ttcctggcag tgcctggagt actatgcagg cttggcagga tccatggctg gcgaacacat 480 ccagctcccg ggtggatcct ttggttacac cagaagggaa ccactagggg tgtgtgttgg 540 aataggagcg tggaactacc cctttcagat cgcctgctgg aagtcggctc cagctctggc 600 ttgtggtaac gccatggtct ttaaaccttc tcccttcacg cccgtgtccg tgttgctgct 660 ggctgaaatc tatactgagg ctggagtccc tcctgggctc ttcaacgtgg tgcagggagg 720 ggctgccaca ggccagttcc tgtgtcagca tcgtgatgtg gccaaagtct ccttcactgg 780 aagcgtgccc accggctcaa agatcatgga gatgtctgct aaaggaatca aacctgtcac 840 cctggaactc ggaggcaagt ctccacttat catcttctca gactgtgaca tgaagaatgc 900 tgtgaagggg gcgctgatgg ccaacttcct tactcaaggc gaggtttgtt gtaatggtac 960 aagggtattt gtgcaaaagg aaattcttga tcaatttaca gaggaagtgg tgaaacagac 1020 gcaaaggata aaaattggag atccccttct ggaagataca aggatgggtc ccctcatcaa 1080 ccgaccacat ctggagcgag tccttgggtt tgttaaagtg gcaaaggagc agggtgctaa 1140 agtgttatgt ggtggagacg tctttgtacc tgaagacccc aaattaaagg atgggtatta 1200 catgagacct tgtgtgttaa ctaattgccg agatgacatg acctgtgtaa aagaagaaat 1260 ctttggacca gttatgtcca ttttatcatt tgacactgaa gctgaggttc tggaaagagc 1320 caacgacacc acttttggac tagctgctgg tgtcttcacc agggacatcc agcgcgccca 1380 cagagtggtg gcggagctcc aggctggaat gtgcttcatt aacaactaca atgtcagtcc 1440 agtggagttg ccctttggtg gatataagaa gtcaggattc ggcagagaga acggccgggt 1500 gacaattgag tactattcac agctgaagac cgtgtgtgtg gagatgggtg acgtggagtc 1560 tgctttttga acacgcggtg acaccagtga ataacgagag ccagctgcac gactgtggca 1620 gtgcggccgc ctgctggttc agacccagaa tattggtcat tcaggataag aaaatggttc 1680 agtgatgctc ttcatggctc attttcctaa gtgaaaatgt acttaagtgt cttttatata 1740 ctaatcagga aagcttgatt ttcctcaaag ctgatttctc taaataatct ttgagagtca 1800 ctaacaactt tccagagaac agagggagga ccaggattgt ccatctccca tggagcccac 1860 ccactcatgg gttcatttca gcatacttta aagaatactt gcctttagag gttcctgggc 1920 gtatcagaag agatttctgc tccttggcgt ttttaagtcc acagtccctt gtcatcccgc 1980 agagaaggct gatagtgggg acagcgggct tggctaacag gtgggtcagt gggccgtgga 2040 tgctgattgg ccagagccag cgctgtggtg gtggtggtgg tggtggtggt ggtggttggg 2100 gaagggggaa tcagctccaa tccttgagtt acagcttgct ctcttacgat ggaagggttt 2160 ccttttaaat gtacagatcc tttttatgcc actgcagtat gctaaaacta aataaatcac 2220 accgacagcc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2280 aaaaaaaaaa acaaaaaaaa aaaaagaaaa aaaaaaaaaa aa 2322 // |
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