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EBI DbfetchID BC105252; SV 1; linear; mRNA; STD; MAM; 3820 BP. XX AC BC105252; XX DT 21-SEP-2005 (Rel. 85, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 6) XX DE Bos taurus ST3 beta-galactoside alpha-2,3-sialyltransferase 2, mRNA (cDNA DE clone MGC:128985 IMAGE:8120862), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-3820 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (15-SEP-2005) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000002329; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000008471; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000009305; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000009574; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000014881; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000018859; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000019150; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000020006; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000026962; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000030999; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000003007; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000011146; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000012592; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000019811; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000025109; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000026645; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000038585; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000043880; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000044153; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000055233; Bos_taurus. DR ImaGenes; IMAGp998C0417476Q. DR ImaGenes; IRAKp961I20252Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: Lee Alexander, USDA, ARS, NPA CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, CC Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, CC Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, CC Jones S, Marra M CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 252 Row: i Column: 20. XX FH Key Location/Qualifiers FH FT source 1..3820 FT /organism="Bos taurus" FT /lab_host="DH10B" FT /strain="L1 Hereford" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-17" FT /clone="MGC:128985 IMAGE:8120862" FT /tissue_type="Ascending colon, 6 month male fetus, L1 FT Hereford" FT /note="Vector: pExpress1" FT /db_xref="taxon:9913" FT gene 1..3820 FT /gene="ST3GAL2" FT /note="synonym: SIAT4B" FT CDS 489..1541 FT /codon_start=1 FT /gene="ST3GAL2" FT /product="ST3 beta-galactoside alpha-2,3-sialyltransferase FT 2" FT /db_xref="GOA:Q6H8M9" FT /db_xref="InterPro:IPR001675" FT /db_xref="InterPro:IPR012163" FT /db_xref="UniProtKB/TrEMBL:Q6H8M9" FT /protein_id="AAI05253.1" FT /translation="MKCSLRVWFLSMAFLLVFVMSLLFTYSHHSTATLPYLDSGALDGA FT PRVKLVPGYAGLQRLSKEGLAGKSCACRRCMGDTGASEWFDSHFNSNISPVWTRENMDL FT PPDVQRWWMMLQPQFKSHNTNEVLEKLFQIVPGENPYRFRDPRQCRRCAVVGNSGNLRG FT SGYGPDVDGHNFIMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKAL FT DLLWIASALSTGQIRFTYAPVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGM FT LVLFFALHVCDEVNVYGFGADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAK FT ASKIEVYRGN" XX SQ Sequence 3820 BP; 791 A; 1110 C; 1113 G; 806 T; 0 other; cgggggttca agggcttccc cgctgcaggg gacgagggtc cgcctcggca tctgctcatg 60 aaccacaagg accccgaatg ctccagactg gatcatttca agccgccaaa gagggggacc 120 cccagagctg gcagccagca accccaaggg actagaaggc tgggatggac tgacctcccc 180 tttgccgggg ctctgggagc agcagagcct ctgtggccca gctagtggca gacggagctg 240 atgaagctgt gagcggggct ggcggccggg acaggagctg ctgctgccgc cggactctgc 300 tggcaccgag ggcgcatgcg caggccccta cctcggtccc tgctcagcac ccgcccgcat 360 gtcctttgca cgtggtgcca aagcacgtgg gctgcgctgt agctggcctg tccgcgggct 420 ggagaagcag tggccgtggt gaggcccgcc tgccgccagc ctgagggccc agctcccggg 480 cgcgcaccat gaagtgctcg ctgcgggtgt ggttcctctc catggccttc ctgctggtgt 540 tcgtcatgtc gctgctcttc acctactccc accatagcac ggccaccctg ccctacctgg 600 actcgggcgc cctggacggg gctccccggg tgaagctggt gccgggctac gctggcctgc 660 agcgcctcag caaggagggg ctggctggca agagctgtgc ctgtcgccgc tgcatgggcg 720 acaccggcgc ctccgagtgg ttcgacagcc acttcaacag caacatctcc cccgtctgga 780 ctcgggagaa catggacctg ccccccgacg tccagaggtg gtggatgatg ctgcagccgc 840 agttcaagtc acacaacacc aacgaagtgc tggagaagct gttccagata gtgccaggcg 900 agaaccccta ccggttccgg gacccccgcc agtgccggcg ctgcgccgta gtgggcaact 960 cgggcaacct gcggggctct ggctatgggc cagacgtgga tgggcacaac ttcatcatga 1020 ggatgaatca ggcaccgacc gtgggctttg agcaggatgt cggcagccga accacgcacc 1080 atttcatgta ccccgagagt gccaagaacc tgcccgccaa cgtcagcttc gtgctggtgc 1140 ccttcaaggc cctggacctc ctgtggatcg ccagcgccct gtccaccggg cagatccgat 1200 tcacctatgc cccagtgaag tccttccttc gagtggacaa agagaaggtc cagatctaca 1260 acccagcctt cttcaagtac atccatgaca ggtggacaga gcatcatggg cggtaccctt 1320 ccactgggat gctggtactc ttctttgccc tgcatgtgtg tgatgaggtg aacgtgtacg 1380 gcttcggggc cgacagccgg ggcaactggc accactactg ggagaataac cggtacgcgg 1440 gcgaattccg gaagacgggc gtgcacgacg ccgacttcga ggcgcacatc atcgacatgc 1500 tggctaaggc cagcaagatc gaggtctaca gagggaactg agcccggacg cgctgcgact 1560 cttcggcccc gccgcgcggc tcccgccggg actcggggtc ggcccggggg cggtgaccta 1620 agcgtggcgc ggcgccctcc ggggcgtcag cgggcgttcg gagcgccgcc gccgcggcct 1680 agaccaatca ctttgcagct cagcgagcgc cggcgtcctc ggccagcgag gagactcccc 1740 cggccgagca gcaatcagcg ccgccggcgg gcggggcctc cagccaatca tgcaactcaa 1800 ggaggacttc cggcgccggg acccctctca gccaatcgat ggccttcggg ggcgggccgg 1860 cggcgattaa tttcccactc cactatgctt ttgggtagga ttttatttca cgctttctaa 1920 ggagtaggag ttccttccgg cttcgagaag tatgctctcc gcaggttcgg caagaggcgt 1980 ctcagtcact ttccggccta acctcgctgg gggcgccgag aaggaaacgg tggggaaagc 2040 gagggacagc ggtggctcgc tccctccttc ccgggagtgc tccgtgaccg cggggcgggc 2100 gggagggcga tcgggcagcc tttcgggtgg gcggggagcg gggcggtcag gtggtttgca 2160 gggagcgctc tttaccccag ggggaaagtt agagccctcc cagaccgccc cggacgccta 2220 gagaactaga tccacatttc tttgatcggt caggcgtaga taggtgagtg caaacccacc 2280 aaagaaatgc ggtgagaatc tggagggcac gtgggtcctc tcctgcctcc tcccctcccg 2340 cccttggccc ccttgtggaa tgatggcctt tctgaccgtg gcatttagtg tctcaccaga 2400 aaactaggat tgtgtgcacc ccttcctagg cgggcgaagt tcgcctaggg cgcaactctg 2460 aaacacaggt gtaagaaata ggacaggaga ctggaaaccc cgtcacatca gatgtcaggt 2520 gcttctcact ccatgtgccc tcggccccta ttgtttgctc acgacctcct cagtgtctct 2580 cccgaggccc tgggtctcct caccaaggca cttgttgctc tgggaggatt gccctgtgat 2640 taggacagtg cagctccccg cccttccccc tttgggtgcc tctagggaga gggagcagca 2700 cgtaggacag aaggctggag atgagaccag ctgtctggtt cttcacccgt caccccccaa 2760 agggggagga aacctcttgc tccgggttgg aatttgcttt aggcttatga tttagctaac 2820 ctgaaattat catgggtggc tgaccaacaa agatgctttt cagatactga gctggccatg 2880 caaatagctg gggaggagtg gacttgcccc ttgcatgcct cctcccctgc ccacatatcc 2940 ccttccctgt gctcactttg caccttttcc ctctgaccct ctttccattt ccagctctag 3000 aagggctgca aagctaacaa ccagaggtta cagctggaag ctacttgcat gactgaaccc 3060 agcttaagtt cctagaggaa gctgctgaag gtattcctca cgcttgaagg ttgggggagt 3120 gtaggagggg aaaagggctt ctgtgaagct tccaaaccac taaaaggatc ccccttccca 3180 acagtgactt aaaaaacagt aagcaaacaa acataaaaac caccctctct tagtgagttg 3240 ataccactcg gcagcctcct ggtcgttggt atagttcctg cagctggctg agggaacagg 3300 agccagcaga ggagtatgtt agaggcttag tggggggcag tgggccccgc taaaagttaa 3360 tatattgaga acttagcttg agtctgtccc ttcccaattc caaaagtagg aggagtgaag 3420 aatgggggtg gcttagtgag gcctttagtg gaacacctct ttcatcactt cagccccatc 3480 attttagaaa gtcaagacca gttattcttg ccagtctcat ctcagtgctt cctaaagagg 3540 ctcttgagtg tttaagagat gaaaaaaatg caattatgcc aaacagtatt gagcagaata 3600 atttatttct tttgtcgtca ttgttccttt tttttctttt gtttgggttt tgttttgttt 3660 agaacattaa taaatcccat tctggaagag gtaggtccca gcacccagcc cagatcttct 3720 tttctacaat agttatttaa gcaaatgttt tttatttttt tccctttctc tttctgaatt 3780 aaaaataaga aactgtaaaa aaaaaaaaaa aaaaaaaaaa 3820 // |
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