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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC105164; SV 1; linear; mRNA; STD; MAM; 1067 BP.
XX
AC   BC105164;
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DT   22-SEP-2005 (Rel. 85, Created)
DT   24-JAN-2007 (Rel. 90, Last updated, Version 5)
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DE   Bos taurus ubiquitin-conjugating enzyme E2L 3, mRNA (cDNA clone MGC:127956
DE   IMAGE:7961643), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1067
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (15-SEP-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000006933; Bos_taurus.
DR   Ensembl-Gn; ENSBTAG00000013038; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000009104; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000017332; Bos_taurus.
DR   ImaGenes; IMAGp998E0116772Q.
DR   ImaGenes; IRAKp961F02242Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Y. Meng, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E,
CC   Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M,
CC   Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson
CC   R, Siddiqui A, Holt R, Jones SJ, Marra MA
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 242 Row: f Column: 2.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1067
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B"
FT                   /strain="Crossbred x Angus"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-04"
FT                   /clone="MGC:127956 IMAGE:7961643"
FT                   /tissue_type="Liver, 6 month old female calf, Crossbred x
FT                   Angus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1067
FT                   /gene="UBE2L3"
FT   CDS             38..502
FT                   /codon_start=1
FT                   /gene="UBE2L3"
FT                   /product="ubiquitin-conjugating enzyme E2L 3"
FT                   /db_xref="GOA:Q3MHP1"
FT                   /db_xref="InterPro:IPR000608"
FT                   /db_xref="InterPro:IPR016135"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3MHP1"
FT                   /protein_id="AAI05165.1"
FT                   /translation="MAASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPP
FT                   YDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQV
FT                   IQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD"
XX
SQ   Sequence 1067 BP; 306 A; 286 C; 243 G; 232 T; 0 other;
     ggatgcattc tgggccagca gcagcaccag agccaagatg gcggccagca ggaggctgat        60
     gaaggagctt gaagaaatcc gcaagtgtgg gatgaaaaac ttccgtaaca tccaggtcga       120
     tgaagctaat ttgctgactt ggcaagggct cattgttccc gacaaccctc cctatgataa       180
     gggggccttc agaatcgaaa tcaactttcc agcagagtac cccttcaaac caccgaagat       240
     cacgttcaaa acgaagatct accacccgaa catcgacgag aaggggcagg tgtgtctgcc       300
     tgtaattagt gctgaaaact ggaagccagc aaccaaaacc gaccaagtca tccagtccct       360
     catagcactg gtgaacgacc cccagccgga gcacccgctc cgggctgacc tagccgaaga       420
     atactctaag gaccgtaaaa aattctgtaa gaatgctgaa gaatttacaa agaaatatgg       480
     ggaaaagcga cctgtggact aaaatctgcc gaatggattc cagcgagtgt gagcagaggc       540
     cccgagcagt gcattcagac accccacaaa gcaggactct ggaaaattga cgcgtgccac       600
     cgcctggcgt ccgcttgtgg cagttactaa ctttctacag ttttcttaat cagaagtggt       660
     ctaggtaacc tgtaaagaaa ggattaaaaa tttaagatgt tctagttctg ctttctttgt       720
     tttaaaaatc actgcttcaa cctactttta aaaaatggtg tttcttttcc tgtccaaatt       780
     tatccaaaat caatttacat ttaggccata aggtttaaaa aaaaggcggg gtgggggggg       840
     aggccctggt tcctctctgc cctgcagctg ccacgttctt gcatttcgtc tgattctcac       900
     tcccccactc ccccaggccc ggccccgcct ccaggcccct ccgctccgcc ctcggccggc       960
     ctggtgtggg agtaagtgca gactcctgac tgatttatag cctcctttga gaacaccgag      1020
     aaacaagcaa acctccactc caacccccaa ccaaaaaaaa aaaaaaa                    1067
//
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