spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC103434; SV 1; linear; mRNA; STD; MAM; 995 BP.
XX
AC   BC103434;
XX
DT   19-AUG-2005 (Rel. 84, Created)
DT   17-NOV-2007 (Rel. 93, Last updated, Version 12)
XX
DE   Bos taurus pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor
DE   of hepatocyte nuclear factor 1 alpha, mRNA (cDNA clone IMAGE:7984810),
DE   partial cds.
XX
KW   .
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-995
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000002718; Bos_taurus.
DR   Ensembl-Gn; ENSBTAG00000011143; Bos_taurus.
DR   Ensembl-Gn; ENSBTAG00000011866; Bos_taurus.
DR   Ensembl-Gn; ENSBTAG00000013699; Bos_taurus.
DR   Ensembl-Gn; ENSBTAG00000018972; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000003522; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000014799; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000015750; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000018206; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000025254; Bos_taurus.
DR   ImaGenes; IMAGp998N0817122Q.
DR   ImaGenes; IRAKp961C19251Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, S. Lobo, L. Guan and S.
CC   Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 251 Row: c Column: 19.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..995
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-11"
FT                   /clone="IMAGE:7984810"
FT                   /tissue_type="Hypothalamus, 8.5 month female Hereford"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            <1..995
FT                   /gene="PCBD1"
FT   CDS             <1..433
FT                   /codon_start=2
FT                   /gene="PCBD1"
FT                   /product="PCBD1 protein"
FT                   /db_xref="GOA:Q3ZBD3"
FT                   /db_xref="InterPro:IPR001533"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3ZBD3"
FT                   /protein_id="AAI03435.1"
FT                   /translation="ARSRLGAARAWPRPTASQSARRRASGPRSHLLLPVPASGMAGKAH
FT                   RLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPE
FT                   WFNVYNKVHITLSTHECAGLSERDVNLASFIEQVAVSMT"
XX
SQ   Sequence 995 BP; 297 A; 247 C; 237 G; 214 T; 0 other;
     tgcgcgctcc cgcctcgggg cggcccgagc gtggccccgc ccgacggctt cccagagcgc        60
     caggcgtcgc gctagtgggc cccgcagcca cctgctgctg cccgtccccg cgtccggcat       120
     ggctggcaaa gcacacaggc tgagtgctga ggaaagggac cagctgctgc caaacctgcg       180
     ggccgtgggg tggaacgagc tggaaggccg ggatgccatc ttcaagcagt tccatttcaa       240
     agactttaat cgggcttttg gcttcatgac aagagtggcc ctgcaggctg agaagttgga       300
     ccaccatccc gaatggttta acgtgtataa taaggtccac atcaccctga gcactcacga       360
     gtgtgcgggc ctttcagaac gggatgtaaa cctggccagc ttcatcgagc aagtagcggt       420
     gtccatgacg tagatcctgc cctctgtcag ctcttccggg gaagggttgg ggcactgaac       480
     tgggatccag agagggagct gggggagccc cgagatgcta ctctagtcaa aactgccaaa       540
     gtgaccctgc tgcctcttta ggggcaagtc cttgctgctg gaaggagagg ccagcatcac       600
     tgctaagacc aggaacttag accagtttta ccccacatca ctttcatctt ctttgaggct       660
     ctatgatgtg tacgctgatt tgaataagct cttctctttc attacaactc tccagcaaaa       720
     ataatgactt tatgtccaag ctgtgtcttg ctccctttct aattcacttc ctaaaaagct       780
     gtgataaaag ctgtgtataa gataaacagt cttatcttag aagctaggac cctagggcca       840
     tctttatcct atgtgacaga aacccatgca cttttatgcc taaaataaaa ctgttgtttc       900
     acttgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa       960
     aaaaaaaaaa aaaaaaaaga aaaaaaaaaa aaaaa                                  995
//
spacer
spacer