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EBI DbfetchID BC103365; SV 1; linear; mRNA; STD; MAM; 2042 BP. XX AC BC103365; XX DT 19-AUG-2005 (Rel. 84, Created) DT 24-JAN-2007 (Rel. 90, Last updated, Version 8) XX DE Bos taurus acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain, mRNA DE (cDNA clone MGC:127548 IMAGE:7951682), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-2042 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000007484; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000009844; Bos_taurus. DR ImaGenes; IMAGp998M2416561Q. DR ImaGenes; IRAKp961M02241Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore, CC University of Alberta CC cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo, L. Guan CC and Dr. S. Moore CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E, CC Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M, CC Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson CC R, Siddiqui A, Holt R, Jones SJ, Marra MA CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 241 Row: m Column: 2. XX FH Key Location/Qualifiers FH FT source 1..2042 FT /organism="Bos taurus" FT /lab_host="XL10-Gold" FT /strain="Crossbred x Angus" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-02" FT /clone="MGC:127548 IMAGE:7951682" FT /tissue_type="Ileum, crossbred X Angus female calf, 6 FT months old." FT /note="Vector: pCMV-SPORT6.0" FT /db_xref="taxon:9913" FT gene 1..2042 FT /gene="ACADS" FT CDS 63..1301 FT /codon_start=1 FT /gene="ACADS" FT /product="acyl-Coenzyme A dehydrogenase, C-2 to C-3 short FT chain" FT /db_xref="GOA:Q3ZBF6" FT /db_xref="HSSP:1WS9" FT /db_xref="InterPro:IPR006089" FT /db_xref="InterPro:IPR006090" FT /db_xref="InterPro:IPR006091" FT /db_xref="InterPro:IPR006092" FT /db_xref="InterPro:IPR009075" FT /db_xref="InterPro:IPR009100" FT /db_xref="InterPro:IPR013764" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/Swiss-Prot:Q3ZBF6" FT /protein_id="AAI03366.1" FT /translation="MAATLLARACGLVRGAPWPWGWRRLHTVYQSVELPETHQMLRQTC FT RDFAEKELFPIAAQVDKEHRFPAAQVKKMGELGLMAMNVPEELSGAGLDYLAYSIAMEE FT ISRGCASTGVIMSVNNSLYLGPILKFGTKEQKQQWVAPFTSGDKIGCFALSEPGNGSDA FT GAAATTARADGDSWVLSGTKAWITNAWEASAVVVFASTDRSLHNKGISAFLVPMPTPGL FT TLGKKEDKLGIRASSTANLIFEDRRIPKDSLLGEPGLGFKIAMQTLDTGRIGIASQALG FT IAQAALDCAVTYAENRSAFGAPLTKLQAIQFKLADMALALESARLLTWRAAMLKDNKKP FT FTKEAAMAKLAASEAATAITHQAMQILGGMGYVKEMPAERHYRDARITEIYEGTSEIQR FT LVVAGHLLKSYRS" XX SQ Sequence 2042 BP; 440 A; 629 C; 613 G; 360 T; 0 other; ggtgctgcgg cccggaggtc gccgggaaga agcccagtac cggcccgccg tgtctgtcct 60 ccatggctgc cacgctgctc gcccgggcct gtggccttgt ccgcggagcc ccctggcctt 120 ggggctggcg tcgcctacat accgtctacc agtctgttga actgcccgag actcaccaga 180 tgctgcggca gacgtgccgc gactttgccg agaaggagct ctttcccatc gcagcccagg 240 tggacaagga gcatcgcttc ccagcagctc aggtgaagaa gatgggcgag ctggggctta 300 tggccatgaa tgtgcccgag gagctcagcg gagccggcct tgattacctg gcctactcca 360 tcgccatgga ggagatcagc cggggctgtg cctccacggg agtcatcatg agtgtcaaca 420 attccctcta cttagggccc atcctgaagt tcggcaccaa ggagcagaag cagcagtggg 480 ttgctccctt cactagtggt gacaaaattg gctgctttgc cctcagtgaa ccagggaacg 540 gcagcgacgc aggggccgcg gccaccaccg cgcgggcaga cggtgactcg tgggtcctga 600 gtggcaccaa ggcctggatc accaacgcct gggaggcctc ggccgtagtg gtcttcgcca 660 gcaccgacag atccttgcat aacaagggca tcagtgcctt cctggtcccc atgcccacac 720 ccggcctcac gctggggaag aaggaagaca agctgggcat ccgggcctcg tccacggcca 780 acctcatctt cgaggaccgt cgcatcccca aggacagcct gctgggggag ccggggctgg 840 gcttcaagat cgccatgcaa accctggaca cgggccgcat cggcatcgcc tcccaggccc 900 tgggcattgc ccaggccgcc ctggactgtg ctgtgaccta cgcggagaac cgcagtgctt 960 tcggggcgcc cctcaccaag ctgcaggcca tccagttcaa gttggcggac atggccctcg 1020 ccctggagag tgcccggctg ctgacctggc gcgctgccat gctgaaggac aacaaaaagc 1080 ctttcaccaa ggaggcggca atggccaagc tggctgcatc ggaggccgca actgccatca 1140 cccaccaggc catgcagatc ctgggcggca tgggctacgt gaaggagatg ccagccgagc 1200 ggcactaccg cgacgcccgc atcaccgaga tttatgaagg caccagtgag atccagaggc 1260 tcgtggtcgc cgggcacctg ctcaagagct accggagctg agccctttct ggagggctga 1320 ccgtgccggc cgaggagccg agctggccgg aggaccctgg gaaaggggga gggagtcacg 1380 tggccttccc actgactccc ccgctgcagc ctgaggggcg gggccacgcc ccctcttgcc 1440 aggacccctc ccacctccca ggcccaggct cctgggtggg cctactgccc tccgttacct 1500 ctctccaccc cagagccggc ttcctaagag cggaggctgg ctgcgacctg gcctgaggat 1560 gcccatctcc agctgtttct tgactttgta ccctctccac cgttgaccgt gccttatttt 1620 cttcatctgg gggcttggcc gtgggaaggg agaaatgatt cccccgggga ctccccgaat 1680 tctgtcctgt gggtcctggc gctcagcagg agacccagcg tctgccgttt cctctgagtt 1740 cagggtctgg aggagtgggt cggaggcccg aacgaccaca tctcgacgca gaagttgtgt 1800 tctctgaggc cttcgccgcc ttggggctgg gtcgttatgg aagccttcct gcgcaccgat 1860 aacctttgta aagtataaat gagtacaggt gaggggtctg acttgtgctt tgggacaatt 1920 atatgtggga accgagtaat aaaggatacc tgtcccctaa aaaaaaaaaa aaaaaaaaaa 1980 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaagaaaa aaaaaaaaaa 2040 aa 2042 // |
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