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EBI DbfetchID BC103319; SV 1; linear; mRNA; STD; MAM; 1946 BP. XX AC BC103319; XX DT 09-SEP-2005 (Rel. 85, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 6) XX DE Bos taurus aspartyl-tRNA synthetase, mRNA (cDNA clone MGC:127203 DE IMAGE:7945797), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-1946 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000009949; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000013123; Bos_taurus. DR ImaGenes; IMAGp998H1916546Q. DR ImaGenes; IRAKp961M18240Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore, CC University of Alberta CC cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo, L. Guan CC and Dr. S. Moore CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, CC Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, CC Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, CC Jones S, Marra M CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 240 Row: m Column: 18. XX FH Key Location/Qualifiers FH FT source 1..1946 FT /organism="Bos taurus" FT /lab_host="XL10-Gold" FT /strain="Crossbred x Angus" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-02" FT /clone="MGC:127203 IMAGE:7945797" FT /tissue_type="Ileum, crossbred X Angus female calf, 6 FT months old." FT /note="Vector: pCMV-SPORT6.0" FT /db_xref="taxon:9913" FT gene 1..1946 FT /gene="DARS" FT /note="synonym: AspRS" FT CDS 40..1545 FT /codon_start=1 FT /gene="DARS" FT /product="aspartyl-tRNA synthetase" FT /db_xref="GOA:Q3SYZ4" FT /db_xref="InterPro:IPR002312" FT /db_xref="InterPro:IPR004364" FT /db_xref="InterPro:IPR004365" FT /db_xref="InterPro:IPR004523" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018150" FT /db_xref="UniProtKB/Swiss-Prot:Q3SYZ4" FT /protein_id="AAI03320.1" FT /translation="MPSANASRRSQEKPREIMDAAEDYAKERYGVSSMIQSQEKPDRVL FT VRISDLTVQKAGEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKF FT AANINKESIVDVEGVVRKVNQKIGSCTQQDVELHVQKIYVISSAEPRLPLQLDDAVRPE FT VEGEEEGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHPFRETLTNKGFVEIQTPK FT IISAASEGGANVFTVSYFKNNAYLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHR FT HLTEFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFL FT EPTLRLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVR FT PFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLVTERALHHGIDLEKIKAYIDS FT FRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP" XX SQ Sequence 1946 BP; 703 A; 325 C; 409 G; 509 T; 0 other; gagggagggt ggtgatcgct gcccagtcta gttgtccaga tgcccagcgc caacgccagc 60 cgcaggagtc aggagaagcc gcgggagatc atggacgcgg cggaagatta tgcaaaagaa 120 agatacggag tatcttcaat gatacaatca caagaaaaac cagatcgagt tttggttcga 180 attagtgatt tgacagtgca aaaagctggt gaagttgttt gggtgcgtgc aagggttcat 240 acaagcagag ctaaaggaaa gcagtgtttc ttagtcctac gacagcagca gtttaatgtc 300 caggctcttg tggcggtagg agaccatgca agcaagcaga tggttaaatt tgctgccaac 360 atcaacaaag agagcatcgt tgatgtggaa ggtgttgtga gaaaagtgaa tcagaaaatt 420 ggaagctgta cacaacaaga tgtagagtta catgttcaaa agatttatgt gatcagttca 480 gctgaacccc gcctgcccct gcagctggac gatgctgttc ggcctgaagt ggaaggagaa 540 gaggaaggaa gagctactgt taaccaggat acgagattag acaacagagt cattgatctt 600 aggacatcaa ctagtcaggc aatcttccgt ctccagtctg gcatctgcca tcctttccga 660 gaaactttaa ctaacaaggg ttttgtggag atccaaactc ctaaaattat ctcagctgcc 720 agtgaaggag gagccaatgt atttactgtg tcatatttta aaaataatgc atacctggct 780 cagtctccac agctgtacaa gcaaatgtgt atttgtgctg attttgagaa ggttttctgt 840 attgggccag tattcagagc tgaagactct aatacacaca gacatctgac tgaatttgtt 900 ggcttggata ttgaaatggc ttttaattac cattaccatg aagttgtgga agaaattgcc 960 gacactttag tgcaaatatt caaaggactt cagaaaaggt ttcaaactga aattcagacg 1020 gtgaataaac agttcccatg tgagccattc aaatttttgg agccaacttt aagactagaa 1080 tactgtgaag cattggctat gcttagggaa gctggaattg aaatgggaga tgaagaagat 1140 ctaagtacac caaatgaaaa actgttgggt cgtttggtaa aggaaaagta tgataccgat 1200 ttttatattc ttgataaata tccattggct gtaagacctt tctataccat gcctgaccca 1260 cgaaatccta aacaatctaa ctcttatgat atgttcatga ggggagaaga aatactgtca 1320 ggagctcaaa gaatacatga ccctcagctg gtaacagaga gagccttaca tcatggaatt 1380 gatttggaga aaattaaggc atacattgat tccttccgtt ttggagcccc tcctcatgct 1440 ggtggaggca ttgggttgga acgagtgact atgctgtttt tgggcttgca caatgttcgt 1500 caaacctcaa tgtttccccg tgatcccaaa agacttactc cttaaagaaa atgttttttt 1560 attctttcca gtaacctgct attaatcaga ctgtacctta ggtacttaaa atatgcaata 1620 aaataaatgt cttatccaaa gtgccacaat tacttttgga ctaattcagt gtacgttact 1680 ttaaaagaga agatttttat aactttgaac atgcttcagt aggaaatggt taaacatttt 1740 aatgaaaaat tcgtattatt atgttaaaag ttcattttgc attactacaa taaatgttaa 1800 acaacaattt taaacagtta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1860 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1920 aaaaaaaaag aaaaaaaaaa aaaaaa 1946 // |
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