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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC103230; SV 1; linear; mRNA; STD; MAM; 703 BP.
XX
AC   BC103230;
XX
DT   19-AUG-2005 (Rel. 84, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 8)
XX
DE   Bos taurus peptidyl-tRNA hydrolase 2, mRNA (cDNA clone MGC:128626
DE   IMAGE:7986388), complete cds.
XX
KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-703
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000016710; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000022212; Bos_taurus.
DR   ImaGenes; IMAGp998P0217126Q.
DR   ImaGenes; IRAKp961H19251Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Y. Meng, M. Taniguchi, S. Lobo, L. Guan and S.
CC   Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 251 Row: h Column: 19.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..703
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-12"
FT                   /clone="MGC:128626 IMAGE:7986388"
FT                   /tissue_type="Heart ventrical, 8.5 month female Hereford"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..703
FT                   /gene="PTRH2"
FT                   /note="synonym: BIT1"
FT   CDS             63..602
FT                   /codon_start=1
FT                   /gene="PTRH2"
FT                   /product="peptidyl-tRNA hydrolase 2"
FT                   /db_xref="GOA:Q3ZBL5"
FT                   /db_xref="InterPro:IPR002833"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3ZBL5"
FT                   /protein_id="AAI03231.1"
FT                   /translation="MISRSLVMEYLTNPGALSLAAGVACGVCLGWGLRMRFGMLPKSSV
FT                   RETNPDTETEASILGESGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPEL
FT                   LKEWEYCGQPKVVVKAPDEETLVELLTHAKVLGLTVSLIQDAGRTQIAPGSRTVLGIGP
FT                   GPADLIDKVTGHLKLY"
XX
SQ   Sequence 703 BP; 200 A; 145 C; 193 G; 165 T; 0 other;
     ggttcggtac ccagaattga agaacgcgaa ggcgccagtg aggcggagga gaggtgcgct        60
     agatgatctc cagatccctg gttatggagt atctgactaa tcctggtgca cttagcttgg       120
     ctgccggagt tgcctgtggc gtgtgcctgg gctggggcct ccgaatgcgc tttgggatgc       180
     tccccaagag ctcagtgagg gagacaaatc ctgacactga aacggaagca agtatcctcg       240
     gagagagtgg ggagtacaaa atgattcttg tggttcgaaa tgacttaaag atggggaagg       300
     ggaaggtggc tgcccagtgc tctcatgctg ctgtttctgc ctacaagcaa attcaaagga       360
     gaaaccctga gttactcaaa gagtgggaat actgtggcca gcccaaagtg gtggtcaaag       420
     ctcctgatga agaaactctg gttgaattat tgacccatgc aaaagtgctg ggactgactg       480
     taagtttaat tcaagatgca ggacgtactc agattgcacc aggctctcga actgttttag       540
     gaattggacc aggaccagca gacctaattg acaaggtcac cggtcaccta aaactttact       600
     aggtggaatt ttgtatgatg atggtggttc caccacacgt gtttgaaact gtcaaattct       660
     aacaataaaa gctgaatttc ttcccccaaa aaaaaaaaaa aaa                         703
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