EBI Dbfetch

ID   BC103058; SV 1; linear; mRNA; STD; MAM; 1464 BP.
XX
AC   BC103058;
XX
DT   19-AUG-2005 (Rel. 84, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 10)
XX
DE   Bos taurus phosphatidylinositol glycan anchor biosynthesis, class C, mRNA
DE   (cDNA clone MGC:128298 IMAGE:7988357), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1464
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000024542; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000034135; Bos_taurus.
DR   ImaGenes; IMAGp998B0317132Q.
DR   ImaGenes; IRAKp961N01250Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, S. Lobo, L. Guan and S.
CC   Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 250 Row: n Column: 1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1464
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-14"
FT                   /clone="MGC:128298 IMAGE:7988357"
FT                   /tissue_type="Fetal liver, 6 month male fetus, Hereford"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1464
FT                   /gene="PIGC"
FT   CDS             272..1165
FT                   /codon_start=1
FT                   /gene="PIGC"
FT                   /product="phosphatidylinositol glycan anchor biosynthesis,
FT                   class C"
FT                   /db_xref="GOA:Q3ZBX1"
FT                   /db_xref="InterPro:IPR009450"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3ZBX1"
FT                   /protein_id="AAI03059.1"
FT                   /translation="MCAQPVANTKEVRWQKVLYERQPFPDNYVDRRFLEELRKNIYARK
FT                   YQYWAVVFESSVVIQQLCSVCVFVVIWWYMDEGLLAPQWLFGTGLASSLIGYVLFDFID
FT                   GGEGRKKSGRTRWADLKSALVFITFTYGFSPVLKTLTESVSTDTIYAMAVFMLLGHLIF
FT                   FDYGANAAIVSSTLSLNMAIFASVCLASRLPRSLHAFIMVTFAIQIFALWPMLQKKLKA
FT                   CTPRSYVGVTLLFAFSALGGLLSISAVGAILFALLLISISCLCPFYLIRLQLFKENIHG
FT                   PWDEAEIKEDLSRFLS"
XX
SQ   Sequence 1464 BP; 353 A; 341 C; 367 G; 403 T; 0 other;
     gaggcgggcg gccgcccttc cccggccgcg cacccctagg aactcgcggg caggaactta        60
     gctgcattgt cctgcctcag agaacaaact catctactgt aggcctagcc tgggtcgctg       120
     cctttgaaag caagggaagg tcaatacaat ataaaccaca actcagcatg gaatttccag       180
     agaagtctta cttcaaaact ttataaagaa cgagaaccac atggacttct gcaagggaga       240
     ttgaagtcgc ctgagtttga gcgaaaggat aatgtgtgcc cagcctgtag ctaacaccaa       300
     agaggtcagg tggcagaagg tcttgtatga gcgacagccc tttcctgata actacgtgga       360
     tcggaggttc cttgaagagc tccggaaaaa catctatgcc cggaaatacc aatattgggc       420
     tgtggtgttt gagtccagtg tggtgataca gcagctgtgc agtgtctgtg tctttgtggt       480
     tatctggtgg tatatggatg agggtcttct ggcccctcag tggctttttg ggaccggcct       540
     ggcttcttca ctgattggct atgttttgtt tgatttcatt gacggaggtg aaggacggaa       600
     gaagagtggg cggacccggt gggctgactt gaagagtgcc ctagtcttca ttactttcac       660
     ctatggcttt tcgccggtgc tgaagaccct gacagagtct gtcagcactg acaccatcta       720
     tgccatggca gtcttcatgc tgttaggtca cctcatcttc tttgactatg gtgccaatgc       780
     tgccattgta tccagcacac tgtccttgaa catggccatc tttgcttctg tctgccttgc       840
     ctcccgcctg ccccgatccc tccatgcctt catcatggtg acgtttgcca tccagatttt       900
     tgccctgtgg cccatgttac agaagaaact gaaggcatgt acaccccgca gctatgtggg       960
     ggtcacgctg ctctttgcat tctcagcctt aggaggcctg ctgtccatca gtgctgtggg      1020
     agccatactc tttgcccttc tgctgatttc catctcatgt ctctgtcctt tctacctcat      1080
     tcgcctgcag ctttttaaag aaaacattca tgggccttgg gatgaggctg aaatcaaaga      1140
     agatttgtcc aggttcctca gctgagttgg ggacctccat tctgttacta agacaagctg      1200
     atagatcagc cttccaacta gtagaagatt tgaaggcaga gtccattctg gaagtggcac      1260
     gctgatgtgg gtgggagatc agagatcaaa agaaaatgtt aacaaaaggc ttgggtggtg      1320
     aaggtgatta tcctttctgt tatcgtatag atgaaaaagc tttgtggggc cctcgaatta      1380
     ttgcctctaa ttcttctctg taacaaatga agtggtgtgg tttctattta ttaaaaaaat      1440
     aacaacacaa aaaaaaaaaa aaaa                                             1464
//