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EBI DbfetchID BC102836; SV 1; linear; mRNA; STD; MAM; 2890 BP. XX AC BC102836; XX DT 09-SEP-2005 (Rel. 85, Created) DT 24-JAN-2007 (Rel. 90, Last updated, Version 6) XX DE Bos taurus isovaleryl Coenzyme A dehydrogenase, mRNA (cDNA clone MGC:127338 DE IMAGE:7953716), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-2890 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000004409; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000005782; Bos_taurus. DR ImaGenes; IMAGp998B1816567Q. DR ImaGenes; IRAKp961P05241Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore, CC University of Alberta CC cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo, L. Guan CC and Dr. S. Moore CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E, CC Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M, CC Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson CC R, Siddiqui A, Holt R, Jones SJ, Marra MA CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 241 Row: p Column: 5. XX FH Key Location/Qualifiers FH FT source 1..2890 FT /organism="Bos taurus" FT /lab_host="XL10-Gold" FT /strain="Crossbred x Angus" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-02" FT /clone="MGC:127338 IMAGE:7953716" FT /tissue_type="Ileum, crossbred X Angus female calf, 6 FT months old." FT /note="Vector: pCMV-SPORT6.0" FT /db_xref="taxon:9913" FT gene 1..2890 FT /gene="IVD" FT CDS 21..1301 FT /codon_start=1 FT /gene="IVD" FT /product="isovaleryl Coenzyme A dehydrogenase" FT /db_xref="GOA:Q3SZI8" FT /db_xref="InterPro:IPR013764" FT /db_xref="UniProtKB/Swiss-Prot:Q3SZI8" FT /protein_id="AAI02837.1" FT /translation="MATAAWLLGRRVASWRMRPPLQSLAGLITQRTNSLLPVDDAVNGL FT NEEQKQLRQTVAKFLQEHLAPQAQEIDQSNEFKNLREFWKQLGNLGVLGITAPVQYGGS FT GLGFLENVLVMEEISRVSGAVGLSYGAHSNLCINQIVRNGNETQKEKYLPKLISGEYIG FT ALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADVLVVYAKTDVTAVPAS FT RGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELVFEDCEVPAANILGHLGKGVYVLMS FT GLDLERLVLAGGPLGIMQAVLDHTIPYLHMREAFGQKIGHFQLMQGKMADMYTRLMACR FT QYVYNVAKACDEGHCTTKDCAGVILYSAECATQVALDGIQCLGGNGYINDFPMGRFLRD FT AKLYEIGAGTSEVRRLVIGRAFNADFH" XX SQ Sequence 2890 BP; 643 A; 763 C; 794 G; 690 T; 0 other; tgtccagggg caaggcagaa atggcgactg cggcttggtt actgggtcgg cgcgtggcga 60 gctggaggat gcgaccgccg ctgcagtctc ttgctggcct gattacccag cggaccaact 120 cgctgttgcc tgtggacgat gcagtcaatg ggctgaacga ggagcagaag cagcttcgtc 180 agaccgtggc taaattcctt caggagcatc tagcccccca ggcccaggag atcgaccaaa 240 gtaatgagtt caagaacctg cgagagtttt ggaagcagct ggggaaccta ggagtcttgg 300 gcatcacagc ccctgttcag tacggtggtt ctggcctggg cttcctggaa aacgtgctgg 360 tgatggagga gatatcccga gtgtctggag cagtggggct cagttatgga gcccactcca 420 acctctgtat caaccaaatt gtgcggaatg gaaacgagac ccagaaggag aagtacctcc 480 ccaagctgat aagtggtgaa tacatcggag ccctggccat gagtgagccc aatgctggct 540 ctgatgttgt ctccatgaag ctgaaagcag aaaagaaagg agatcactat gtcctgaatg 600 gcaacaagtt ctggatcacc aatggtcctg atgcagatgt ccttgttgtc tatgccaaga 660 ctgatgtgac tgctgtgcca gcttctcggg gcatcacagc cttcattgtg gagaagggga 720 tgccgggctt cagcacctcc aagaagctgg acaagctagg gatgaggggc tccaatacct 780 gtgagctggt cttcgaagac tgcgaggttc ctgctgccaa catcctgggt cacctaggta 840 agggcgtcta tgtgctgatg agtgggctgg acctggagcg gctggtgctg gccggtgggc 900 cccttgggat catgcaggcc gtcctcgacc acactattcc ctacctgcac atgagggagg 960 cctttggcca gaagattggc cacttccagt tgatgcaggg gaagatggca gatatgtaca 1020 cccgtctcat ggcctgtcgt cagtacgtct acaacgttgc caaggcctgt gatgagggcc 1080 actgcactac caaggactgt gcaggggtga ttctttactc ggccgagtgt gccacacagg 1140 tagccctgga cggcatccag tgtttgggtg gcaatggcta catcaacgac tttcccatgg 1200 gccgcttcct gagagatgcc aagctgtatg agatcggggc tgggaccagc gaagtgaggc 1260 ggctcgtcat cggcagagct ttcaatgcag acttccacta acccctagac ccttcaccct 1320 gcttcccagc accttgaggc ctttctctgg aaggacaact gccacatctc tcctcccaac 1380 aagccccacc caccggccca gaagtgtgca gtgatttaac atggactcct caggaaacag 1440 gctagcttct ctggggcttt ggtgactgtg cccttgctct gtaacttcag agcctgctgc 1500 tcccactccc aggaggggca ccttttcctc ggatgagcct gtgccaggga accctctgct 1560 caagtacacc agaagtatta ccaagttcat taatttgaac ttggtagtct cttttcttta 1620 tggggaaaaa tacccacaaa acccagcctt tgtttctgcc agtttctgtg gggcattagc 1680 tttcatcagt gtgtcagtgc agcctcctcc gtccctcatt ttttagagct ggaattccat 1740 cacttgggca gagctctagg aacaggcatt tcagaacacc tgtgccaccc agagtccaca 1800 gtgggcagag gtctgcatgc tcgtgaaggc cgggctcgat gcctccagca ctaccctgcc 1860 agtgtcactg tccattcctg gccatgtgac agcccccagc tgactgggca gcaggcctgg 1920 gttggctggc tcgactccag ccgaggctgc ctgcgcacat ttctctggac accctatggc 1980 tatttgttat cactccacag tggctgctgc cattttgtat taaacatatc atgaagcaaa 2040 cccatctgct tctaaactgg tgttttggga gagaagcagt ctacttgttc ctgccttctg 2100 tctggctcca gccctgtgtc cttggagcgc agctgatcca ggccctgctt ccagcctgct 2160 cactggtgat gggagacgca ggggtggaat caacccacag gagagaggag tactcagtcc 2220 tccttttcca gatcttgcag tgatttttaa agaaaggagg gagcccaggg tggaaaaagt 2280 cttggagcca gaaggaaaca taaattgccg gaaaccatcc ccatgttttt ttaaaaggat 2340 caaaacaatt tggttttccc caaatcagaa ctggagctag aatccagatc agcagaaata 2400 ggggttctga gaatgccagc gtggagcccc actgcatggc tgcttggatg gagcacagtc 2460 agggtgtgac atttttgggt tgtcccactc catctgagtt ccctaaaaga gacctggttt 2520 tcttggtccg cagcccagcg gcgcctgttc tgacgtttgg tcctggcctg tagccaggag 2580 ctgttcccag cctgatgctt gtgacaggtg ctatccgttc cttgccaacc ccagcccagt 2640 cctatgctga ggggcttgta gccctgtccc ttcagtttcc caccctgctc cctactgtgt 2700 tggagatgaa tgtggctaaa atggtggtct tgctggactt aaaatgtaac tggggacttc 2760 catggcaatc caatggttaa gactctgtgc ttgcaatgca gtaggtgcag gtttgatccc 2820 tggttggaga attaagatcc cacatgcttt ggcaccaact gaaatgtgtt ctagaaaaaa 2880 aaaaaaaaaa 2890 // |
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