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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC102709; SV 1; linear; mRNA; STD; MAM; 1039 BP.
XX
AC   BC102709;
XX
DT   13-SEP-2005 (Rel. 85, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 9)
XX
DE   Bos taurus cysteine dioxygenase, type I, mRNA (cDNA clone MGC:127872
DE   IMAGE:7961913), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1039
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000017442; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000023186; Bos_taurus.
DR   ImaGenes; IMAGp998P0716772Q.
DR   ImaGenes; IRAKp961F14242Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Y. Meng, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 242 Row: f Column: 14.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1039
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B"
FT                   /strain="Crossbred x Angus"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-04"
FT                   /clone="MGC:127872 IMAGE:7961913"
FT                   /tissue_type="Liver, 6 month old female calf, Crossbred x
FT                   Angus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1039
FT                   /gene="CDO1"
FT   CDS             68..670
FT                   /codon_start=1
FT                   /gene="CDO1"
FT                   /product="cysteine dioxygenase, type I"
FT                   /db_xref="GOA:Q3SZU4"
FT                   /db_xref="InterPro:IPR010300"
FT                   /db_xref="InterPro:IPR011051"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3SZU4"
FT                   /protein_id="AAI02710.1"
FT                   /translation="MERTEVLKPRTLADLIRVLHQLFAGEEINVEEVQAVMEAYESNPA
FT                   EWAVYAKFDQYRYTRNLVDQGNGKFNLMILCWGEGHGSSIHDHTDSHCFLKMLQGNLKE
FT                   TLFAWPDKKSNEMIKKSERILRENQCAYINDSIGLHRVENISHTEPAVSLHLYSPPFDT
FT                   CHAFDQRTGHKNKVIMTFHSKFGIKTPFTTSGSLENN"
XX
SQ   Sequence 1039 BP; 323 A; 239 C; 238 G; 239 T; 0 other;
     tgggctcgct cagttcctcc tccatcgcag cccagcagcg agacgcgtgc cgccagttac        60
     tcgggggatg gagcggaccg aggtgctaaa gccccgcacc ctggccgatc tgatccgcgt       120
     cctgcaccag ctcttcgccg gcgaggagat caacgtggag gaagtgcagg ccgtcatgga       180
     agcctatgag agcaaccccg ccgagtgggc agtgtacgcc aagttcgacc agtacaggta       240
     tactcgaaat cttgtggatc aaggaaatgg aaagtttaat ctcatgattc tatgctgggg       300
     tgaaggacat ggcagcagta tccatgatca caccgactcc cactgctttc tgaagatgct       360
     gcagggaaat ctaaaggaga cattgtttgc ctggcctgac aagaaatcca atgagatgat       420
     caagaagtct gaaagaatct tgagggaaaa ccagtgtgcc tacatcaatg attccattgg       480
     cttacatcga gtagagaata ttagccatac agagcctgcc gtgagccttc acttgtatag       540
     tccgcctttt gacacatgcc acgcctttga tcaaagaaca ggacataaaa acaaagtcat       600
     catgacattc catagcaaat ttggaatcaa gactccattt acaacttcag gatccctgga       660
     gaacaactaa ggggcaccag gccctctgag gttttacttt aaggtccagc gaattccgcc       720
     ttggacagga agatctgcta ccacttgcct gtccagtaat acactttaca aggccaatat       780
     gagatctacc ataaggcaga tgctagttat aaggcattaa gtaagcaaat agtgccccga       840
     gctactagag aagaaaaatc ccactaaaga tgaaaaggct tatgattttc aaggtcaaat       900
     caagcaggtt ttacctgtta aacccatcag aaccatacta ggaatgtcaa tgatagtttt       960
     tatagttttt ggaaacactt tggtctctgg attgtaatta gcaataaata aaagcaagat      1020
     atcaaaaaaa aaaaaaaaa                                                   1039
//
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