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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC102666; SV 1; linear; mRNA; STD; MAM; 1688 BP.
XX
AC   BC102666;
XX
DT   09-SEP-2005 (Rel. 85, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 7)
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DE   Bos taurus carbonic anhydrase III, muscle specific, mRNA (cDNA clone
DE   MGC:127744 IMAGE:30957347), complete cds.
XX
KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1688
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000013476; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000009745; Bos_taurus.
DR   ImaGenes; IMAGp998F1216774Q.
DR   ImaGenes; IRAKp961J21242Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Y. Meng, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 242 Row: j Column: 21.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1688
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B"
FT                   /strain="Crossbred x Angus"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-04"
FT                   /clone="MGC:127744 IMAGE:30957347"
FT                   /tissue_type="Liver, 6 month old female calf, Crossbred x
FT                   Angus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1688
FT                   /gene="CA3"
FT   CDS             30..812
FT                   /codon_start=1
FT                   /gene="CA3"
FT                   /product="carbonic anhydrase III, muscle specific"
FT                   /db_xref="GOA:Q3SZX4"
FT                   /db_xref="InterPro:IPR018441"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3SZX4"
FT                   /protein_id="AAI02667.1"
FT                   /translation="MAKEWGYADHNGPDHWHELFPNAKGENQSPIELNTKEISHDPSLK
FT                   PWTASYDPGSAKTILNNGKTCRVVFDDTYDRSMLRGGPLAAPYRLRQFHLHWGSSDDHG
FT                   SEHSVDGVKYAAELHLVHWNSKYNSYATALKHADGIAVVGVFLKIGREKGEFQLLLDAL
FT                   DKIKTKGKEAPFNNFNPSCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQI
FT                   AKLRTLYSSAENEPPVPLVRNWRPPQPIKGRIVKASFK"
XX
SQ   Sequence 1688 BP; 457 A; 416 C; 408 G; 407 T; 0 other;
     ggggagccga ggcagcgccg cgcaccgcca tggccaagga gtggggctac gccgaccaca        60
     acggtcctga ccattggcat gaacttttcc cgaatgccaa gggagagaac cagtcgccca       120
     ttgaactgaa cactaaagag atcagccacg acccttccct gaagccatgg acagcatcct       180
     atgacccagg ctctgccaag accatcctaa ataatgggaa gacctgcagg gttgtgtttg       240
     atgatactta tgacaggtca atgctgagag gtggtcccct cgccgcgcca taccggctcc       300
     gccagttcca cctccactgg ggctcctcgg acgatcacgg ctcggagcac agcgtggatg       360
     gagtcaagta cgcagcagag ctccatttgg ttcactggaa ttcaaagtat aacagttatg       420
     caactgctct gaagcatgcc gatggtatag ctgtggttgg ggtttttctg aagataggac       480
     gtgagaaagg cgagttccag cttctccttg atgcactgga caaaattaag acgaagggca       540
     aggaggcgcc cttcaacaac ttcaacccgt cctgcctgtt ccccgcctgc cgggactact       600
     ggacctacca cggctccttt accacgccgc cctgcgagga gtgcatcgtg tggctgctgc       660
     tgaaggagcc catcacggtc agctccgacc agatagccaa gctgcgcact ctgtactcca       720
     gcgcggagaa cgagcccccg gtgcccctgg tgaggaactg gcgccctccg cagcccatca       780
     agggcaggat cgtgaaggcc tccttcaagt gaggccgctg gagctcgccc tcttcaggaa       840
     aggaagccgg ccctgcagag cttggtccct cacctcctct tggtgcttct gactccagta       900
     tactccgggt ccatccccgt gtttccacgc agagcagagc agatgagaga cgccatcacc       960
     aggaaatcag agctactatt cccaggatct gatgtgagag cgcttggcct ctgtgataac      1020
     accttgccta taaaagtagc atttctagta aggtttcaaa gaagaagaag aagcagggtg      1080
     aggagagtaa agacagggaa aaagtgcctc ctgggcaccg tttctgtgtc atcttaaatt      1140
     tcacagaact tccgtttacc ctttttctat gatgtgttat ccatcctaaa gaaatacagt      1200
     acttctatac gtgggcgtag aggagtctgc agattctgta gcagaaatta aagtgactgt      1260
     gaacatcaag aatggagatg attatgcatt ttaaccctta aataaaccaa taagaagtgc      1320
     atcatttatt aacatttaaa accgctgtag aggtctcctg gttttgatta tcaatgaaag      1380
     taaaacacac tgaccaggaa ttttttttaa aaatttgacc cattatttga atgttttctt      1440
     catgaaggta gttgacttta tcctgatatt tttctttacc tgaaggaggg ccatttattt      1500
     ttcattttac tacttttatc tttgcatgct tcttaaggta aaaaatgtct ctgatgtatt      1560
     tccaatgtga gggtgggatt aacaagtcct agaactcgca ggagtgaatg actgcacttg      1620
     aaataaaagc agtgtactga tcatccaaac taataaagac atgaatgcag acaaaaaaaa      1680
     aaaaaaaa                                                               1688
//
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