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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC102611; SV 1; linear; mRNA; STD; MAM; 1392 BP.
XX
AC   BC102611;
XX
DT   13-SEP-2005 (Rel. 85, Created)
DT   06-NOV-2007 (Rel. 93, Last updated, Version 8)
XX
DE   Bos taurus 2,3-bisphosphoglycerate mutase, mRNA (cDNA clone MGC:127743
DE   IMAGE:30957902), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1392
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000008895; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000011713; Bos_taurus.
DR   ImaGenes; IMAGp998M1516775Q.
DR   ImaGenes; IRAKp961K06242Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Y. Meng, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 242 Row: k Column: 6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1392
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B"
FT                   /strain="Crossbred x Angus"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-04"
FT                   /clone="MGC:127743 IMAGE:30957902"
FT                   /tissue_type="Liver, 6 month old female calf, Crossbred x
FT                   Angus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1392
FT                   /gene="BPGM"
FT   CDS             166..945
FT                   /codon_start=1
FT                   /gene="BPGM"
FT                   /product="2,3-bisphosphoglycerate mutase"
FT                   /db_xref="GOA:Q3T014"
FT                   /db_xref="InterPro:IPR005952"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3T014"
FT                   /protein_id="AAI02612.1"
FT                   /translation="MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSDGLQEARNCGKQL
FT                   KALNFEFDLVFTSILNRSIHTAWLILEELGQEWVPVESSWRLNERHYGALISLNREQMA
FT                   LNHGEEQVRLWRRSYNVTPPPIEESHPYYHEIYNDRKYKVCDVPLDQLPRSESLKDVLE
FT                   RLLPYWNERIAPEVLRGKTVLISAQGNSCRALLKYLEGISDEEIINITLPTGVPILLEL
FT                   DENLRTVGPHQFLGDQEAIQAAIKKVDDQGKVKRADK"
XX
SQ   Sequence 1392 BP; 378 A; 307 C; 354 G; 353 T; 0 other;
     gcttctggct ccggggctag aaaagagagt cgatgccggg ccgcagtgat gagccctggg        60
     agacgctggc tgttcggttt tccgaggagc ggctgctact ggtggccttt ttgcagatat       120
     attgttgtca ctgaacactg gccctagaga agctcagcca tcaatatgtc caagtacaaa       180
     ctgattatgt taagacatgg agagggtgcc tggaataaag agaaccgctt ttgtagctgg       240
     gtggatcaga aactcaacag tgatggacta caggaagcgc ggaactgtgg gaagcaactc       300
     aaagcactaa actttgagtt tgatctcgtg ttcacatcca tcctgaaccg gtctatccac       360
     acagcctggc tgatcctgga agagctgggg caggagtggg ttcctgtgga gagctcctgg       420
     cgtctcaacg agcgtcacta cggagccttg atcagtctca acagggagca gatggcattg       480
     aatcatggcg aggagcaggt gaggctgtgg agaaggagct acaacgtgac ccctcctccc       540
     atcgaggagt cccatcctta ctaccatgaa atctacaacg accggaaata taaagtgtgt       600
     gatgtgcctt tggatcagct gccacgatcc gagagcttaa aggatgttct ggagagactc       660
     cttccctatt ggaatgagag gattgctcct gaagtattgc gtggtaaaac cgttctgata       720
     tctgctcaag gaaatagctg ccgggcactc ctgaaatatc tggaaggtat ctcggatgaa       780
     gaaattatca acattactct tcctactggg gtccccattc tcctggaact ggacgagaac       840
     ctgcgtactg ttgggcctca ccagttcctg ggcgaccaag aggctatcca agcagccatt       900
     aagaaagttg acgatcaagg aaaagtgaaa cgagctgaca aataaagttt ttcccacgtg       960
     ctggctagga atagctgcag aaggaatggc atgcggtgtg ttatgagtgc tcatctccca      1020
     cacccccccc cctttttttt tctgtcttcc cacctgattt ttccagatct aggctgtggg      1080
     gtagagtttg tagaggtaat taggtcttaa cgttggccca gttaaaggct ttaggatgcc      1140
     catagcctta tgtgctaacc cctgccagcc tccttttaat tagtcactaa gttaatcacc      1200
     agtggggctt aatcaatgtc ctaagtttct gagatggaaa agcaacaagt gaagcttaag      1260
     ttcaaggtcg tcctcattca gtaaatcagt attgagtcac tattgacaga ccttcacttc      1320
     aataagacgt ttgtatttat agaaaatttc tgggatgata ataaaggata ttagataaaa      1380
     aaaaaaaaaa aa                                                          1392
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