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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC102567; SV 1; linear; mRNA; STD; MAM; 1304 BP.
XX
AC   BC102567;
XX
DT   13-SEP-2005 (Rel. 85, Created)
DT   24-JAN-2007 (Rel. 90, Last updated, Version 7)
XX
DE   Bos taurus 3-hydroxybutyrate dehydrogenase, type 2, mRNA (cDNA clone
DE   MGC:127950 IMAGE:7963185), complete cds.
XX
KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1304
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000002526; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000003277; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000052922; Bos_taurus.
DR   ImaGenes; IMAGp998I0716778Q.
DR   ImaGenes; IRAKp961O17242Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E,
CC   Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M,
CC   Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson
CC   R, Siddiqui A, Holt R, Jones SJ, Marra MA
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 242 Row: o Column: 17.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1304
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-05"
FT                   /clone="MGC:127950 IMAGE:7963185"
FT                   /tissue_type="Testis, 7 year old male, Hereford"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1304
FT                   /gene="BDH2"
FT                   /note="synonym: DHRS6"
FT   CDS             261..998
FT                   /codon_start=1
FT                   /gene="BDH2"
FT                   /product="3-hydroxybutyrate dehydrogenase, type 2"
FT                   /db_xref="GOA:Q3T046"
FT                   /db_xref="InterPro:IPR002198"
FT                   /db_xref="InterPro:IPR002347"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3T046"
FT                   /protein_id="AAI02568.1"
FT                   /translation="MGRLDGKVIVLTAAAQGIGRAAALAFAKEGAKVIATDINDSKLQE
FT                   LDKYPGIHTRVLDVTKKKQIDQFANDIERLDVLFNVAGFVHHGTILDCEETDWDFSMNL
FT                   NVRSMYLMIKAFLPKMMAQKSGNIINMSSVASSIKGVVNRCVYSTTKAAVIGLTKSVAA
FT                   DFIQQGIRCNCVCPGTVDTPSLQERIQARPNPEEALSDFLKRQKTGRFATAEEVALLCV
FT                   YLASDESAYITGNPVIIDGGWSL"
XX
SQ   Sequence 1304 BP; 374 A; 301 C; 300 G; 329 T; 0 other;
     gagtgatctg gaggacgcca tgaatttgct gctctaaaat gtgacgtctt gggagaaagc        60
     agccattttg tgccttgctg tgtggtcaga ggcatacact aagaactgca ggatgagaga       120
     aagaactcgg ttccctgcag acagcctcat ttgatcatca cctgactctt cactacctgt       180
     aacctcatca ctagcctttc ctgtcaccct gcgatctgtt acagtccaag cattgaccag       240
     attaaactgc aggttccagg atgggtcgac ttgatgggaa ggtcattgtc ctgacggctg       300
     ctgctcaggg gatcggccgg gcagccgcat tggcttttgc aaaagaaggt gccaaagtca       360
     tagccaccga tatcaatgac tccaaacttc aggaactgga taagtaccca ggtattcaca       420
     ctcgggtcct tgatgtcaca aagaagaagc aaattgacca gtttgccaat gacattgaga       480
     gacttgatgt tctctttaac gttgctggtt tcgtccatca cggaaccatc ctggactgtg       540
     aagagacaga ctgggacttc tcgatgaacc tcaacgtccg cagcatgtac ctgatgatca       600
     aggcttttct tcctaagatg atggctcaga aatctggcaa cattatcaac atgtcctctg       660
     tggcttccag catcaaaggc gttgtgaaca ggtgcgtgta cagcacaacc aaggcggccg       720
     tgatcggcct cacaaagtcc gtggctgcag acttcatcca gcagggtatc cggtgcaact       780
     gtgtgtgtcc aggaacagtt gataccccat ctctgcaaga aagaatacaa gccagaccaa       840
     atcctgaaga ggcactgagc gatttcctaa agagacagaa aacaggaaga tttgcaactg       900
     cagaagaagt agccctgctc tgcgtgtact tggcctctga tgaatctgcc tacatcacgg       960
     ggaatcctgt catcattgat ggaggctgga gtttgtgact tcagtcaggg tctccctgct      1020
     gggaaggtgg gcccttcctg accacagtta acctacttac gaagaaaact cacccatcct      1080
     ctctttccag ttaacggcac atcaatgaaa atgagacctt ttgatgatgt cattgttcac      1140
     aagaatctga gtctttaaat acattaatct ctttctagtc tgttctgaaa tcactgtagt      1200
     ttggtgagat aatgaactca ctgcaaaaaa gaatatttta agaataagcc tcagtttgta      1260
     agcatgtaaa aattaaaatg tgaataagaa aaaaaaaaaa aaaa                       1304
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