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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC102557; SV 1; linear; mRNA; STD; MAM; 1334 BP.
XX
AC   BC102557;
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DT   13-SEP-2005 (Rel. 85, Created)
DT   24-JAN-2007 (Rel. 90, Last updated, Version 6)
XX
DE   Bos taurus lactate dehydrogenase A-like 6B, mRNA (cDNA clone MGC:127890
DE   IMAGE:7962303), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1334
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   ImaGenes; IMAGp998D1316776Q.
DR   ImaGenes; IRAKp961M11242Q.
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CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E,
CC   Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M,
CC   Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson
CC   R, Siddiqui A, Holt R, Jones SJ, Marra MA
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 242 Row: m Column: 11.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1334
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-05"
FT                   /clone="MGC:127890 IMAGE:7962303"
FT                   /tissue_type="Testis, 7 year old male, Hereford"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1334
FT                   /gene="LDHAL6B"
FT   CDS             71..1216
FT                   /codon_start=1
FT                   /gene="LDHAL6B"
FT                   /product="lactate dehydrogenase A-like 6B"
FT                   /db_xref="GOA:Q3T056"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3T056"
FT                   /protein_id="AAI02558.1"
FT                   /translation="MSWTVGILRASQRAGTVRANFLCLGMAPSPCPPAATPLGGAWAVA
FT                   PASKMATVKCELMKNFTSEEPVRNSKISIVGTGSVGMACAVSILLKGLSDELALVDVDE
FT                   GRLKGETMDLQHGSLFVKMPNIVSSRDYVVTANSNLVIITAGARQEKGETRLNLVQRNV
FT                   AIFKLMMSSIVQYSPRCKLIVVSNPVDILTYVAWKLSAFPQNRVIGSGCNLDTARFRFL
FT                   IGQRLSIHSESCHGWILGEHGDSSVPVWSGVNIAGVPLKELNLDIGTDKDPEQWKNVHK
FT                   DVVASAYEIIKMKGYTYWAIGLSVADLTESILKNLRRVHPVSTRIKGLYGINEEVFLSV
FT                   PCILGESGITDLIKVKLAPEEEARLQKSAKTLWDIQKELKF"
XX
SQ   Sequence 1334 BP; 357 A; 277 C; 348 G; 352 T; 0 other;
     gacagctctc tcctttggag tttctaaggg cacctgctgc tttctgcctt cacttctcaa        60
     gtgaatagcc atgagctgga ctgtgggaat cctgcgggcc agccagagag cgggcactgt       120
     gagggcgaat ttcctgtgcc tgggaatggc cccaagcccc tgcccgccgg cagccacccc       180
     cctcgggggc gcctgggccg tggcccccgc gtccaagatg gcgacggtca agtgtgagct       240
     gatgaagaat ttcacctcag aggagcctgt tcgcaacagt aagatctcta tcgtaggaac       300
     cggatcggtt ggcatggcct gtgccgtcag catcctgtta aaaggcttga gcgatgaact       360
     cgccctggtg gatgttgatg aaggccgact gaagggtgag acaatggatc ttcagcatgg       420
     cagccttttc gtgaaaatgc caaacattgt ttccagcaga gattacgttg tcactgcaaa       480
     ctccaacctc gtgattatca cggcaggtgc acgccaggaa aaaggagaaa cacgccttaa       540
     tttagtccag cgaaatgtgg ccatctttaa attaatgatg tccagtattg ttcagtacag       600
     tccgcgctgc aaactgattg tggtttccaa tccggtggat atcttgacgt acgtagcctg       660
     gaagttgagt gcctttcccc aaaaccgtgt tattggaagt ggttgtaatc tggacactgc       720
     ccgtttccgt ttcttgattg ggcaaaggct tagtatccat tctgaaagct gtcatgggtg       780
     gatccttgga gagcacggag actcaagtgt tcctgtgtgg agtggagtga acatcgcagg       840
     tgtccctctg aaggaactga acttagatat aggaactgat aaagatccgg agcagtggaa       900
     aaatgttcac aaagatgtgg ttgctagtgc ctatgagatt attaaaatga aaggttatac       960
     ttattgggcc attggcctgt ctgtagctga cctaacagaa agtattttga agaatcttag      1020
     gagagtgcat ccagtttcca ccagaattaa gggtctctat ggaataaatg aagaagtatt      1080
     cctcagtgtt ccttgtatcc tgggggagag tggtattact gaccttataa aagtaaagtt      1140
     ggcccctgaa gaagaggctc gtctgcagaa gagtgcaaaa acactttggg atattcaaaa      1200
     ggagcttaag ttttaaagtt gtttaaaact acctaccatt ctgaagttac tgaagaaaga      1260
     tagtggttat ggtcttgtgt attctagttt ttgaataaac ttgaattcct aaaatttgaa      1320
     aaaaaaaaaa aaaa                                                        1334
//
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