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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC102304; SV 1; linear; mRNA; STD; MAM; 1201 BP.
XX
AC   BC102304;
XX
DT   13-SEP-2005 (Rel. 85, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 8)
XX
DE   Bos taurus spermidine/spermine N1-acetyltransferase 1, mRNA (cDNA clone
DE   MGC:127572 IMAGE:7949053), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1201
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000017363; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000023087; Bos_taurus.
DR   ImaGenes; IMAGp998P1116554Q.
DR   ImaGenes; IRAKp961E13241Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore,
CC   University of Alberta
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 241 Row: e Column: 13.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1201
FT                   /organism="Bos taurus"
FT                   /lab_host="XL10-Gold"
FT                   /strain="Crossbred x Angus"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-02"
FT                   /clone="MGC:127572 IMAGE:7949053"
FT                   /tissue_type="Ileum, crossbred X Angus female calf, 6
FT                   months old."
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1201
FT                   /gene="SAT1"
FT   CDS             183..698
FT                   /codon_start=1
FT                   /gene="SAT1"
FT                   /product="spermidine/spermine N1-acetyltransferase 1"
FT                   /db_xref="GOA:Q3T0Q0"
FT                   /db_xref="InterPro:IPR000182"
FT                   /db_xref="InterPro:IPR016181"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3T0Q0"
FT                   /protein_id="AAI02305.1"
FT                   /translation="MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVMLTEKDLLEDG
FT                   FGEHPFYHCLVAEVPKEHLTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFG
FT                   IGSEILKKLSQVAMKCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEY
FT                   LLKMAAEE"
XX
SQ   Sequence 1201 BP; 439 A; 209 C; 259 G; 294 T; 0 other;
     ggcgcgcgcg gctccagttg cagtgagctg cttgtcttac gttgttcgca gaggttcgcc        60
     gggtcatggt gccatcctga ctgggaagag gacgctccgg ggagacgaat gaggaaccac       120
     ctcctcctac tgttcaagta caggggcctg gtccgcaaag ggaagaaaag caaaagtcga       180
     aaatggctaa attcgtgatc cgcccggcca ccgctgccga ctgcagtgac atcctgcggc       240
     tgatcaagga attggctaaa tacgaataca tggaagagca agtaatgtta actgaaaaag       300
     atctgctgga agacggtttc ggagagcacc ccttctacca ctgcttagtt gcagaagtgc       360
     ccaaggagca cctgactccg gaaggacaca gcattgttgg ttttgccatg tactatttta       420
     cctatgatcc atggatcggc aaactgttgt atcttgagga cttctttgtg atgagcgatt       480
     atagaggctt tggcataggc tcagaaattc tgaagaagct aagccaggtt gcaatgaagt       540
     gtcgctgcag cagcatgcac ttcttggtgg cagagtggaa tgaaccatct atcaacttct       600
     acaaaagaag aggtgcctct gatctatcca gcgaagaggg atggagactc ttcaagatcg       660
     acaaggagta cttgctaaaa atggcagcag aggagtgagg agtgctggtg tagaaaatga       720
     cagcttccat tctattttag aataacttct caacttatct tgctttctct cctctttgta       780
     gtgaaataat agaatgagca cccattccaa agctttatta ccagtggcgt tgttgcatgt       840
     ttgaaataag gtctgtttaa gatggcaatc ttgtatacag gttggagaca gatttctctt       900
     ttaacatctt ttgataaaca acaggtggta tgataatgtc tatgaaaaaa acttcattct       960
     tgtgagtcat ttaaatgtgt acaatgtaca cactggtact tagagtttct gttttgattc      1020
     tttttttaat aaagtaccct ttgatttaat taaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1080
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1140
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaagaaaaa aaaaaaaaaa      1200
     a                                                                      1201
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