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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC102193; SV 1; linear; mRNA; STD; MAM; 1341 BP.
XX
AC   BC102193;
XX
DT   13-SEP-2005 (Rel. 85, Created)
DT   02-NOV-2007 (Rel. 93, Last updated, Version 7)
XX
DE   Bos taurus quinoid dihydropteridine reductase, mRNA (cDNA clone MGC:127076
DE   IMAGE:7943002), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1341
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000040333; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000055681; Bos_taurus.
DR   ImaGenes; IMAGp998D0816539Q.
DR   ImaGenes; IRAKp961H11240Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore,
CC   University of Alberta
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 240 Row: h Column: 11.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1341
FT                   /organism="Bos taurus"
FT                   /lab_host="XL10-Gold"
FT                   /strain="Crossbred x Angus"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-02"
FT                   /clone="MGC:127076 IMAGE:7943002"
FT                   /tissue_type="Ileum, crossbred X Angus female calf, 6
FT                   months old."
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1341
FT                   /gene="QDPR"
FT   CDS             47..775
FT                   /codon_start=1
FT                   /gene="QDPR"
FT                   /product="quinoid dihydropteridine reductase"
FT                   /db_xref="GOA:Q3T0Z7"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3T0Z7"
FT                   /protein_id="AAI02194.1"
FT                   /translation="MAAAAGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVQENEE
FT                   ASANVVVKMTDSFTEQADQVTAEVGKLLGTEKVDAILCVAGGWAGGNAKSKSLFKNCDL
FT                   MWKQSVWTSTISSHLATKHLKEGGLLTLAGARAALDGTPGMIGYGMAKAAVHQLCQSLA
FT                   GKSSGLPPGAAAVALLPVTLDTPVNRKSMPEADFSSWTPLEFLVETFHDWITEKNRPSS
FT                   GSLIQVVTTEGKTELTAASP"
XX
SQ   Sequence 1341 BP; 278 A; 352 C; 416 G; 295 T; 0 other;
     ggcaatccgg gcggcggcgg cagcggcagc cgaacgcggc ggagggatgg cggcggccgc        60
     gggcgaggcg cgccgggtgc tggtgtacgg cggccggggc gcgctgggct cgcgatgcgt       120
     gcaggccttc cgggcccgca actggtgggt tgccagcatc gacgtgcagg agaacgaaga       180
     ggccagtgcc aacgtcgtgg ttaaaatgac ggactcgttc acggagcagg ccgaccaggt       240
     gacagctgag gtggggaagc tcctgggcac agagaaggtg gacgcgatcc tttgtgtggc       300
     tggaggatgg gccgggggca atgccaagtc caagtcgctc tttaaaaact gtgacctgat       360
     gtggaagcag agcgtgtgga catccaccat ctccagccac ctggccacca agcacctcaa       420
     ggaaggaggc ctcctgacct tggcaggggc cagggccgcc ctggacggga cgcccgggat       480
     gatcggctac ggcatggcca aggccgcggt tcaccagctc tgccagagcc tggccgggaa       540
     gagcagtggc ctgccgcccg gggctgcagc cgtcgccctg ctcccggtca ccctggacac       600
     cccggtgaac aggaagtcaa tgcccgaagc cgacttcagc tcctggacgc ccttggagtt       660
     cctggtcgaa accttccatg actggatcac agagaagaat cgaccaagct caggaagcct       720
     aatccaggtg gtgaccacgg aggggaagac agagcttacc gcagcatctc cataagcttc       780
     gtttcaccgt ctgtcagaaa agtcatcagt ccatccgcac agccgagtgt ggcccttgtt       840
     ttctgtaatc ctgtttgtgg gatgtgattc taagtcctgt tttcctctcg cctaatgtgc       900
     atttgttctc ctaggatggt atccaagttt gtgtgaaata aaagcatgtg aggctcacag       960
     acagcagcgt gggtcagtgt tatccacgag atttgggagg tctcaggacg accccctctg      1020
     cgttggtgtc gtattgaatt gcttttgaga ctctgcgtct gagtccctga ccgtggctgt      1080
     tgaccgactc gttcagagat ttgttgggaa tggggacatt tggagcctga cttatttctg      1140
     aatgttgtgc ctgtatcaca gatgtagttt tcgtagcctc gaattcatct gccttaaagc      1200
     tccttctgtg gtataagcaa aatcctgtgg actctgtcaa ggtgtctttt tcctgtgaag      1260
     ttgccaagtg cccacttgtg atggtgtggt gtttaccctc ctaataaatg cacttcgttt      1320
     atggcaaaaa aaaaaaaaaa a                                                1341
//
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