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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC102070; SV 1; linear; mRNA; STD; MAM; 1085 BP.
XX
AC   BC102070;
XX
DT   13-SEP-2005 (Rel. 85, Created)
DT   05-NOV-2008 (Rel. 97, Last updated, Version 10)
XX
DE   Bos taurus ribose 5-phosphate isomerase A, mRNA (cDNA clone IMAGE:7942711),
DE   partial cds.
XX
KW   .
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1085
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (15-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000002866; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000003719; Bos_taurus.
DR   ImaGenes; IMAGp998H0516538Q.
DR   ImaGenes; IRAKp961G15240Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore,
CC   University of Alberta
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 240 Row: g Column: 15.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1085
FT                   /organism="Bos taurus"
FT                   /lab_host="XL10-Gold"
FT                   /strain="Crossbred x Angus"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-02"
FT                   /clone="IMAGE:7942711"
FT                   /tissue_type="Ileum, crossbred X Angus female calf, 6
FT                   months old."
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            <1..1085
FT                   /gene="RPIA"
FT   CDS             <1..797
FT                   /codon_start=3
FT                   /gene="RPIA"
FT                   /product="RPIA protein"
FT                   /db_xref="GOA:Q3T186"
FT                   /db_xref="InterPro:IPR004788"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3T186"
FT                   /protein_id="AAI02071.2"
FT                   /translation="LPGRSQFGAGSTSTGVRETNIVCPGPSAMSKAEEAKKLAGRAAVE
FT                   NHVRNNQVLGIGSGSTIVHAVQRIAERVEQENLKLVCIPTSFQARQLILQYGLTLSDLD
FT                   RHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGNASRFIVIADFRKDSKNLGDQW
FT                   HKGIPIEVIPMAYVPVSRTVTQKFGGVIELRMAVNKAGPVVTDNGNFILDWKFDRVHKW
FT                   SEVNIAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREKPF"
XX
SQ   Sequence 1085 BP; 280 A; 248 C; 301 G; 256 T; 0 other;
     agttgccggg acgttcgcag ttcggcgctg gcagcacaag taccggcgtc agggagacta        60
     acatcgtctg tccgggcccg tccgcgatgt caaaggccga ggaggccaag aagctggctg       120
     gccgcgcggc cgtggagaac cacgtgagga ataaccaagt gctgggaatt gggagtggtt       180
     ctacaattgt ccacgctgtg cagcgaatag ctgaaagagt ggaacaagag aatctgaagc       240
     tcgtctgtat tcccacctcc ttccaggccc gtcaactcat cctgcagtat ggcttaactc       300
     tcagtgacct ggaccgacac ccagagatcg atcttgccat cgatggtgct gatgaagtcg       360
     acgctgacct caacctcatc aagggtggtg gaggctgcct gacccaggag aagattgtgg       420
     ccggcaatgc cagtcgcttc atcgtgattg ccgatttcag gaaagattca aagaacctcg       480
     gggatcagtg gcacaagggc atccccattg aggtcatccc tatggcctat gtcccagtga       540
     gccgaactgt gacccagaag tttgggggcg tgattgaact tcgcatggcc gtcaacaagg       600
     caggtcctgt ggtaacggat aatgggaact ttatcctgga ctggaagttt gaccgggtcc       660
     acaaatggag tgaagtgaac atagccatca aaatgatccc aggtgtggtg gacacggggc       720
     tgttcatcaa catggccgag agagtctact tcgggatgca ggacggctcg gtgaacatga       780
     gggagaagcc gttctgaatg ggccctgcag gagcagagtg tgttcctctt gcgtccccag       840
     cccaccgcca aggtggccat gcctctctga gcctttgcct taatgtatct gtgccaggtg       900
     gacagcttgg cagggtgagg gttaaatcca gtcttctgaa gtattgttat taaatgtctt       960
     tttaaaaaga gagatataaa catatatata tttttactat taaaaatgct cagttgtttt      1020
     tttttaataa agtggaactt gatttcatgt tttataagaa acatttacca aaaaaaaaaa      1080
     aaaaa                                                                  1085
//
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