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EBI DbfetchID BC099766; SV 1; linear; mRNA; STD; ROD; 1143 BP. XX AC BC099766; XX DT 27-JUL-2005 (Rel. 84, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 4) XX DE Rattus norvegicus intelectin 1 (galactofuranose binding), mRNA (cDNA clone DE MGC:124684 IMAGE:7931002), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-1143 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1143 RG NIH MGC Project RA ; RT ; RL Submitted (24-JUL-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000013156. DR Ensembl-Gn; ENSRNOG00000004678; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000006196; Rattus_norvegicus. DR ImaGenes; IMAGp998P0816351Q. DR ImaGenes; IRAKp961E22243Q. DR ImaGenes; IRBPp993D0748D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Jeff Green/Paturu Kondaiah, NCI. CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: National Institutes of Health Intramural CC Sequencing Center (NISC), CC Gaithersburg, Maryland; CC Web site: http://www.nisc.nih.gov/ CC Contact: nisc_mgc@nhgri.nih.gov CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., CC Young,A., Zhang,L.-H. and Green,E.D. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 243 Row: e Column: 22 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 77917589. XX FH Key Location/Qualifiers FH FT source 1..1143 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NCI_CGAP_Pr49" FT /clone="MGC:124684 IMAGE:7931002" FT /tissue_type="Prostate, pool of NCI_CGAP_Pr30, 40, 41 and FT NCI_CGAP_Pr29, 39, 42" FT /note="Vector: pCMV-SPORT6.1" FT /db_xref="taxon:10116" FT gene 1..1143 FT /gene="Itln1" FT CDS 69..1010 FT /codon_start=1 FT /gene="Itln1" FT /product="intelectin 1 (galactofuranose binding)" FT /db_xref="GOA:Q499T8" FT /db_xref="InterPro:IPR002181" FT /db_xref="UniProtKB/TrEMBL:Q499T8" FT /protein_id="AAH99766.1" FT /translation="MTQLGFLLFLIVATRGGSAAKEDLETNKGTHSFFDSLSRSCKEIK FT EENTGAQDGLYFLRTENGVIYQTFCDMTTAGGGWTLVASVHENNMGGKCTVGDRWSSQQ FT GNRADYPEGDGNWANYNTFGSAEGATSDDYKNPGYFDIQAENLGIWHVPNNSPLHSWRN FT SSLLRYRTFTGFLQHLGHNLFGLYQKYPVKYGEGKCWTDNGPALPVVYDFGDAQKTASY FT YSPYGQKEFTAGFVQFRVYNNERAASALCAGMKVTGCNSEAHCIGGGGFFPEGNPLQCG FT DFGAFDWNGYGTHIGYSSSREITEAAVLLFYR" XX SQ Sequence 1143 BP; 297 A; 279 C; 319 G; 248 T; 0 other; aagaaaggtt cctgtcatta gccggccagc aactctcagc tcctgccagg tgcagaggga 60 agacgaccat gacccaactc ggctttctgc tgtttctcat cgttgccacc agagggggca 120 gtgcggctaa agaggacctg gaaaccaaca aagggaccca ttctttcttt gactctctgt 180 ccagaagctg caaggaaatc aaggaggaga acacaggggc tcaagatggc ctctatttcc 240 tgcgcacgga gaatggtgtc atctaccaga ccttctgtga catgaccact gcaggtggtg 300 gctggaccct ggtggctagc gtgcatgaga acaacatggg tgggaagtgc acagtgggcg 360 atcgctggtc cagtcagcaa ggcaacagag cagattaccc agagggggat ggcaattggg 420 ccaactacaa cacctttggg tctgcagagg gtgccacaag tgatgactac aagaaccctg 480 gctacttcga catccaggct gagaacctgg gcatctggca cgtgcccaac aacagccccc 540 tgcacagctg gaggaacagc tccctgctgc ggtaccgcac cttcactggc ttcctgcagc 600 atctgggcca taatctgttt ggcctctacc agaagtaccc ggtgaaatat ggagaaggaa 660 agtgttggac tgacaatggc ccggcgttac ctgtggtcta tgactttggt gatgctcaga 720 agactgcctc ttattattcc ccctatggcc agaaggaatt cactgcagga tttgttcagt 780 tcagagtgta taacaatgag agagcggcca gtgccttgtg tgctggcatg aaggtcactg 840 gatgtaattc tgaagctcac tgcatcggtg gaggaggatt ctttccagaa ggtaacccct 900 tgcagtgtgg agacttcggg gcgtttgatt ggaacggata cggaactcac attgggtaca 960 gcagtagccg ggagataact gaagcagccg tgcttctgtt ctatcgctga gagctctgtg 1020 gggtggaccc agacttctcc aatctgtagg ctcccaggca tggcgacaca atgacctagt 1080 aactagaatg ctaatgacca gaaaagcgga ataaatcatg ttcattgaaa aaaaaaaaaa 1140 aaa 1143 // |
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