 |
|
EBI DbfetchID BC099351; SV 1; linear; mRNA; STD; VRT; 932 BP. XX AC BC099351; XX DT 04-JUL-2005 (Rel. 84, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 3) XX DE Xenopus laevis Dual specificity phosphatase DUPD1, mRNA (cDNA clone DE IMAGE:6940664), partial cds. XX KW . XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-932 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-932 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-932 RA Klein S., Gerhard D.S.; RT ; RL Submitted (01-JUL-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp958H073267Q. DR ImaGenes; IRALp962F0469Q. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Drs. Donald Brown and Liquan Cai CC cDNA Library Preparation: CLONTECH Laboratories, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAL Plate: 69 Row: f Column: 4 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 68534443. XX FH Key Location/Qualifiers FH FT source 1..932 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Tad1" FT /clone="IMAGE:6940664" FT /tissue_type="Whole, tadpole, metamorphosis, stage 53" FT /note="Vector: pDNR-LIB" FT /db_xref="taxon:8355" FT gene <1..932 FT /gene="dupd1" FT CDS <1..712 FT /codon_start=2 FT /gene="dupd1" FT /product="dupd1 protein" FT /db_xref="GOA:Q4KL92" FT /db_xref="HSSP:1VHR" FT /db_xref="InterPro:IPR000340" FT /db_xref="InterPro:IPR000387" FT /db_xref="InterPro:IPR020405" FT /db_xref="InterPro:IPR020417" FT /db_xref="InterPro:IPR020422" FT /db_xref="UniProtKB/Swiss-Prot:Q4KL92" FT /protein_id="AAH99351.1" FT /translation="HSVSQAYKDGCSLRYTKNTVISIKTQKMPADTPIRKKPNAYASVV FT DPDTGYCTPGAFELERLFWHGAPKYTHVNEVWPNLYIGDEKTALDRYSLEKNGFTHILN FT AAHGRWNVDTGPEYYSDMTVEYYGVEAEDLPSFNLSQFFYPAAQFIHKALSTPNSKLLV FT NCAMGRSRSASLVLAYLMIYKNMTVVESITQVLKHRCILPNRGFLKQLRELDIKLALEK FT RDTHGTANKAQKDD" XX SQ Sequence 932 BP; 322 A; 192 C; 184 G; 234 T; 0 other; acacagtgtg tcccaggcat acaaggacgg ctgttctctc aggtacacca agaatactgt 60 tatatcaata aaaacacaga agatgcctgc tgacacaccc atccgaaaaa agcctaatgc 120 ctatgcttca gtggttgatc cagacacggg gtactgtaca ccaggggcat ttgaactaga 180 aagacttttc tggcatggag cacccaaata cacacacgtt aatgaagtat ggcctaacct 240 ttatattgga gatgagaaaa ctgcattgga ccgatacagc cttgagaaga atggtttcac 300 ccatattttg aatgcagctc atgggcgctg gaatgtagac actggacctg agtattacag 360 tgatatgact gtagaatatt atggggtgga agcagaagat ttaccaagct ttaaccttag 420 tcagttcttt taccctgctg ctcaatttat ccacaaagct ctaagcaccc ctaacagtaa 480 gttgttggtc aactgtgcta tgggccgtag ccgttctgcc tcccttgttc tggcatatct 540 catgatctac aagaacatga ctgttgttga gtcaatcaca caagtgttaa aacatcgatg 600 cattctgccc aacagaggct ttctcaagca gttgagagag cttgatataa agttggctct 660 ggagaagcgg gacacacatg gcacagccaa caaggcacaa aaggatgact aatgcaaaaa 720 acaatattag aaatactaca atgtgacaaa cctctgctgc aattctgaaa acaagaggaa 780 atgaactggc cttctctgtt tcaatatttt tatttacgtg caaagcaata aaccatacat 840 atcaatatga atgacagttt gcaaagtaca taacatacta gtaataaaga tcatttgtct 900 gtcaaaaaaa aaaaaaaaaa aaaaaaaaaa aa 932 // |
|