 |
|
EBI DbfetchID BC098804; SV 1; linear; mRNA; STD; ROD; 2126 BP. XX AC BC098804; XX DT 04-JUL-2005 (Rel. 84, Created) DT 19-MAR-2009 (Rel. 100, Last updated, Version 7) XX DE Rattus norvegicus cyclin-dependent kinase 10, mRNA (cDNA clone MGC:112847 DE IMAGE:7376321), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-2126 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2126 RG NIH MGC Project RA ; RT ; RL Submitted (01-JUL-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000021214. DR Ensembl-Gn; ENSRNOG00000016088; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000021607; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000066552; Rattus_norvegicus. DR ImaGenes; IMAGp998D1515528Q. DR ImaGenes; IRAKp961I24225Q. DR ImaGenes; IRBPp993D0239D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Drs. Josef Lazar & Howard Jacob, Medical CC College of Wisconsin CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 225 Row: i Column: 24 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 71043645. XX FH Key Location/Qualifiers FH FT source 1..2126 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_249" FT /clone="MGC:112847 IMAGE:7376321" FT /tissue_type="Spleen, rat" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..2126 FT /gene="Cdk10" FT CDS 466..1542 FT /codon_start=1 FT /gene="Cdk10" FT /product="cyclin-dependent kinase 10" FT /db_xref="GOA:Q4KM47" FT /db_xref="HSSP:1URW" FT /db_xref="InterPro:IPR000719" FT /db_xref="InterPro:IPR002290" FT /db_xref="InterPro:IPR008271" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR017441" FT /db_xref="InterPro:IPR017442" FT /db_xref="UniProtKB/Swiss-Prot:Q4KM47" FT /protein_id="AAH98804.1" FT /translation="MSQCQIWVRHHLCCSFQIPTLAASLFQLGRCRSVKEFEKLNRIGE FT GTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVV FT GNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCILLQVLRGLQYLHRSFIIHRDLK FT VSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWA FT VGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLAGQYSLRKQPYN FT NLKHKFPWLSEAGLRLLNFLFMYDPKKRATAGDCLESSYFKEKPLPCEPELMPTFPHHR FT NKRAAPAATEGQSKRCRP" XX SQ Sequence 2126 BP; 503 A; 571 C; 579 G; 473 T; 0 other; accatgaaca cataagttac agactcccca ataagacccc agaatactat ggcccgggca 60 agctatttct ctgaccccta acattctaga ggcagctgtt tcccataagt gggctaactt 120 ttgtttcgtt gcctcccctg accctgctcc ccaccccagc ctgcaaaagg aagtggatca 180 gctagctctc ctcagtctgg aagcccttcc cacatctcac agatcgttac ccctggatag 240 ctttccttac tccgtgagtc ggtgttggag gctggatcct cctgcacaga ggtgtttgtg 300 tccatggctt gtggccattt gtcactagac agcagacgtc tggaacatgg ggtgggaggg 360 aatatgtagg ccatcttcag tgtgcttcag tatttcaaag taattccagt ggtgtccgtc 420 cccagataca tggttgcttt ctgtttggta agcaagatgc aagtgatgtc tcagtgccag 480 atatgggtga gacaccactt gtgctgtagc ttccagatcc ccacactggc tgcctctctc 540 ttccagctcg gaagatgccg aagcgttaag gagttcgaga agctgaaccg gattggcgag 600 ggcacctatg gcattgtgta tcgagcccgg gatacgcaga cggatgaaat tgttgccctg 660 aagaaggtgc ggatggacaa agagaaagat ggcatcccca tcagcagcct gcgtgaaatc 720 acactgctcc tgcgtctccg ccatcccaac attgtggagc tgaaggaggt ggttgttggc 780 aaccacctgg agagcatctt cctggtcatg ggttactgtg aacaagatct ggccagccta 840 ttggaaaata tgccaacgcc cttctcggag gcccaggtta agtgcatcct gctgcaagtg 900 cttcgaggcc ttcagtacct gcaccggagc ttcatcatcc acagggacct gaaggtgtcc 960 aacttgctca tgacagataa gggctgtgtg aagacagccg atttcggcct ggctcgggcc 1020 tatggtgttc cagtaaagcc aatgactccc aaggttgtta ccctctggta ccgagcccca 1080 gagctgctgc ttggaactac tacccagact accagcatcg acatgtgggc tgttggctgc 1140 atcctggcag agctgctggc ccataagccc cttctccctg gcacttccga gatccaccag 1200 atcgacttga tcgtacagct gttggggaca ccgagtgaga atatctggcc tggtttctcc 1260 aagctgcccc tggccggcca gtacagcctg aggaaacagc cctacaacaa cctcaagcac 1320 aagttcccat ggctctcaga ggccggactg cgcctgctca acttcctctt catgtatgac 1380 cctaagaaaa gggcaacagc aggagactgc ctggagagtt cctacttcaa ggagaagccc 1440 ctaccctgcg agccggagct catgcctacc ttcccccacc accgtaacaa gcgtgctgcc 1500 ccagctgcca ctgaggggca gagcaaacga tgccggccct gaatgagtcc agcccaccct 1560 tccaaatcct catggatcat cagccaacga ctgggggggg gggggggggc tccaggccaa 1620 caggcctttg cctcttccaa ttggccagcc tcttcagctg actcctccct gacatggaca 1680 gggaggttgc tgagtggggt acccaggata gaactattgt agcaccatct ggtggcctat 1740 cttgtctatc agtgaagcct ggcttcttgg gggacagagc tggtgctgag aggcctaagg 1800 gccccagtca gtatatgttg gaactgaagc tgggcaccag cctggaatga acaggcccag 1860 gagatcataa ctgttcttgc ttggcgacta ggagccgccc aggacagata agctatagtc 1920 accctggcag ggttgatggg gcttcaggtg ggaaggaggg agcaggtgtc agttgggata 1980 gaatactttg acaactgtca gaatgaaagc tttcagtggg tgtggctggc actggtgccc 2040 agggagagaa tgggtggatt gcttttccgg gggaggagag ataaaaagct tttccagtaa 2100 aaaaaaaaaa aaaaaaaaaa aaaaaa 2126 // |
|