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EBI DbfetchID BC097814; SV 1; linear; mRNA; STD; VRT; 2496 BP. XX AC BC097814; XX DT 03-JUN-2005 (Rel. 84, Created) DT 22-JUN-2005 (Rel. 84, Last updated, Version 2) XX DE Xenopus laevis hypothetical protein LOC414460, mRNA (cDNA clone MGC:115532 DE IMAGE:3377167), complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-2496 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-2496 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-2496 RA Klein S., Gerhard D.S.; RT ; RL Submitted (01-JUN-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998A088238Q. DR ImaGenes; IRAKp961A07228Q. DR ImaGenes; IRBHp990H0283D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Wellcome/CRC Institute CC cDNA Library Preparation: N. Garrett, P. LeMaire, A.M. Zorn, and CC J.B. Gurdon (Wellcome/CRC Institute). CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 228 Row: a Column: 7 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis. XX FH Key Location/Qualifiers FH FT source 1..2496 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="Wellcome CRC pSK egg" FT /clone="MGC:115532 IMAGE:3377167" FT /tissue_type="Egg, xenopus" FT /note="Vector: pBluescript SK-" FT /db_xref="taxon:8355" FT gene 1..2496 FT /gene="LOC414460" FT CDS 73..2169 FT /codon_start=1 FT /gene="LOC414460" FT /product="LOC414460 protein" FT /db_xref="GOA:Q4V7N2" FT /db_xref="InterPro:IPR018314" FT /db_xref="UniProtKB/Swiss-Prot:Q4V7N2" FT /protein_id="AAH97814.1" FT /translation="MGRKNRRNRQRRTEQRSPAEEERRKAREQAAWEGGYPEIIKENKL FT FEHYYQELKIVPDGEWDKFMDALREPLPATIRITGYKSHAKEILHCLKEKYFKELPDIE FT VDGQKIEAPQPLSWYPEELAWHTNLSRKIIRKSPELEKFHQFLVSETESGNISRQEAVS FT MIPPVLLNVQPHHKILDMCAAPGSKTAQIIEMLHADMNVPFPEGFVIANDVDNKRCYLL FT VHQAKRLNSPCIMVVNHDASSIPRLLIENNGSREVLYYDRILCDVPCSGDGTMRKNIDV FT WKKWTTLNSLQLHGLQIRIATRGVEQLAEGGRMVYSTCSLNPVEDEAVIVSLLDKSEGS FT LELADVASELPGLKWMPGITQWRVMTKEGQWFEKWEDVPTSRHTQIRPTMFPLKDEEKL FT KSMNLNRCMRILPHHQNTGGFFVAVLIKKAPMPWNKRQPKLQRRPPVSVCDASVAPEIV FT KAVADISAIADEPAVDAENGETKPCTNQSGSSKTDSVCCPPPSKKMKLFGFKEDPFVFL FT SEDDPIFEPIQKFYALDPSFPKKNLLTRTQEGKKRQLYMVSKELRNVLLHNSEKMKVIN FT TGIKVLCRNNDGEQYGCAYRLAQEGIYSLYPFINARILTVSVEDIKVLLTQENPFLSKF FT SKETQKQANNLDMGSIVLKYEPDPQQPETLQCPIVLCGWRGKTSIRSFVFFLHRINLVQ FT WIFI" XX SQ Sequence 2496 BP; 775 A; 464 C; 545 G; 712 T; 0 other; ctattggtgt ttggatcatc cacgtttctt tgttgccctt taccactctt gtcgttgcac 60 attgggtgta tcatgggccg caaaaatcgt cgcaatcgcc aaagacgtac tgagcaacga 120 agtcctgcgg aggaagagcg gcgcaaagct agagaacagg cggcttggga aggtggttac 180 cccgaaatca tcaaagaaaa caaattattt gaacattatt atcaggaact gaagattgtg 240 cctgatgggg agtgggacaa gttcatggat gctctccggg aaccccttcc agctactata 300 cgaatcacag gatacaaaag ccatgctaaa gaaatactgc attgtctgaa ggagaaatac 360 tttaaagaat tgccagatat tgaggttgat ggacagaaga tagaagcccc tcagccattg 420 agttggtacc ctgaagagct tgcttggcat actaacctga gcaggaaaat aataagaaag 480 tctccagaac tggaaaagtt tcatcaattt cttgtcagcg aaacagaatc gggcaacatt 540 agtcgccaag aggctgttag tatgattcca ccagtccttc tgaatgttca gccacatcac 600 aagattctgg atatgtgtgc tgctcccgga tcaaaaacag cccaaataat tgaaatgttg 660 catgcagata tgaatgtacc ctttcctgaa ggttttgtca ttgctaacga tgttgacaat 720 aagcgctgtt acttacttgt tcatcaagcc aagcgactaa atagtccatg cattatggta 780 gtaaaccatg atgcctccag cattcctaga ctactcatag agaacaatgg ttccagagag 840 gttttgtact atgaccgaat actttgtgat gtaccgtgca gtggtgatgg gactatgagg 900 aaaaacattg acgtgtggaa gaagtggaca accttaaaca gcttgcagtt gcatgggctc 960 cagattagga ttgctactcg tggggttgaa cagttggcag aagggggtcg aatggtttat 1020 tctacatgct ctttgaatcc tgttgaagat gaggctgtta tagtttcttt gttggacaaa 1080 agtgaaggtt ccctggagct tgctgatgtg gcttcagaac ttcctggctt aaaatggatg 1140 cctgggatta cccagtggag ggtaatgaca aaagaagggc agtggtttga aaaatgggag 1200 gatgttccca caagcagaca tactcagatt cgcccaacaa tgtttccttt aaaagatgaa 1260 gagaaattga aatcaatgaa tctaaaccgt tgcatgagga tactaccaca tcatcaaaac 1320 actggtggat tctttgtagc tgtgttgata aagaaggcac ctatgccatg gaacaaacga 1380 cagccaaagc tgcaaaggag gcctcctgtt tcagtctgtg atgcatctgt tgctcctgag 1440 attgtgaaag ctgtcgctga tatttcagca attgcagatg aacctgctgt agatgcagag 1500 aatggcgaaa ctaaaccttg tacaaaccag agtggttcta gtaaaactga tagtgtttgc 1560 tgcccacctc cttccaaaaa aatgaagttg tttggtttta aagaagatcc ctttgtcttt 1620 ctttctgagg acgatccgat ttttgaacca atccagaaat tctatgcact tgatccttca 1680 ttcccaaaaa agaacttact gacacgaaca caagagggga aaaaaaggca gttgtatatg 1740 gtctctaagg agctgagaaa tgtacttctc cataacagtg agaagatgaa ggtaataaac 1800 actggtatta aggtgctatg ccggaacaat gatggggaac agtatggctg tgcttacaga 1860 ttagcacaag agggcatata ttctctatat ccattcatca atgcaagaat cctaactgta 1920 tctgttgaag atatcaaagt tctgctcact caagaaaatc catttcttag taaatttagt 1980 aaagaaacac aaaaacaagc taataatctt gatatgggaa gcattgtgct taaatatgaa 2040 cctgatccac agcaaccaga gactttgcag tgccccattg ttctttgtgg ctggcgtggg 2100 aaaacatcaa ttcgttcttt tgtttttttt ttacacagaa taaatttagt acagtggatt 2160 tttatttaat cagagaaaag tgatttgtta tttaaagggg aagtatggca tgagagtctt 2220 acttgccctt ttaaagtaga catcacctct ctaagtttaa cactgagtaa gcctttatga 2280 tcttgcgctc tcgctctcta cagctatata tatatatcat tttttttatt atatgggcta 2340 gtttgtggca tccattgttc aggatgcaac attattgtaa ttccggactt tataactctt 2400 ggtttcattt ccattttgcg aaatcacctg aaaatatact gcaaatttta ttttaaaata 2460 aagataaaga tgcattgctt aaaaaaaaaa aaaaaa 2496 // |
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