EBI Dbfetch

ID   BC097765; SV 1; linear; mRNA; STD; VRT; 1637 BP.
XX
AC   BC097765;
XX
DT   03-JUN-2005 (Rel. 84, Created)
DT   19-MAR-2009 (Rel. 100, Last updated, Version 3)
XX
DE   Xenopus laevis Probable fructose-2,6-bisphosphatase TIGAR, mRNA (cDNA clone
DE   MGC:115461 IMAGE:6326376), complete cds.
XX
KW   MGC.
XX
OS   Xenopus laevis (African clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Xenopus.
XX
RN   [1]
RP   1-1637
RX   DOI; 10.1002/dvdy.10174
RX   PUBMED; 12454917.
RA   Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W.,
RA   Richardson P.;
RT   "Genetic and genomic tools for Xenopus research: The NIH Xenopus
RT   initiative";
RL   Dev. Dyn. 225(4):384-391(2002).
XX
RN   [2]
RP   1-1637
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [3]
RC   NIH-MGC Project
RP   1-1637
RA   Klein S., Gerhard D.S.;
RT   ;
RL   Submitted (01-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Xenopus Gene Collection (XGC), National
RL   Institute of Child Health and Human Development, 6100 Executive Boulevard,
RL   Room 4B01, Rockville, MD 20892-7510, USA
XX
DR   ImaGenes; IMAGp998E0113774Q.
DR   ImaGenes; IRAKp961K16228Q.
XX
CC   Contact: XGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Wellcome/CRC Institute
CC   cDNA Library Preparation: N. Garrett, P. LeMaire, A.M. Zorn, and
CC   J.B. Gurdon (Wellcome/CRC Institute).
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Sequencing Group at the Stanford Human Genome
CC   Center, Stanford University School of Medicine, Stanford, CA  94305
CC   Web site:       http://www-shgc.stanford.edu
CC   Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
CC   Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
CC   R. M.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 228 Row: k Column: 16
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 66912067.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1637
FT                   /organism="Xenopus laevis"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="Wellcome CRC pSK egg"
FT                   /clone="MGC:115461 IMAGE:6326376"
FT                   /tissue_type="Egg, xenopus"
FT                   /note="Vector: pBluescriptSK-"
FT                   /db_xref="taxon:8355"
FT   gene            1..1637
FT                   /gene="tigar"
FT   CDS             68..895
FT                   /codon_start=1
FT                   /gene="tigar"
FT                   /product="tigar protein"
FT                   /db_xref="GOA:Q4V7R0"
FT                   /db_xref="InterPro:IPR001345"
FT                   /db_xref="InterPro:IPR013078"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q4V7R0"
FT                   /protein_id="AAH97765.1"
FT                   /translation="MARFALTIVRHGETRYNKEKLLQGQGIDEPLSEMGFKQADAAGRF
FT                   LSNVRFTHVFSSDLIRAKQTACAIMRNNQLSEDIKIMYDPRLRERKYGDAEGRPLSELK
FT                   VMAKKAGGQCPSYTPPGGETLEQVRACAKDFFEYLCQLVMAESSVKEKSELGASGMVGI
FT                   MSTDLAPFVNHNKEPTIFGESRDVTLDASVLLVSHGAYMRNWIKYFVEDLQFTFPPELK
FT                   KSRELSVSPNTGISHFIVTVGSGATRKPEIQCVCINLHGHLSDIDADTSHYQV"
XX
SQ   Sequence 1637 BP; 465 A; 340 C; 398 G; 434 T; 0 other;
     cgcatagaga gagtctctgg aattggagga agagctgcgg tataaaccgg ttatctatcc        60
     gcccgtcatg gccaggtttg ccttaaccat cgtgagacat ggggaaaccc gatacaacaa       120
     ggagaagctg ctgcaagggc aaggaataga tgagccgctc tcagaaatgg gattcaagca       180
     ggcagacgct gcgggcaggt ttctgagcaa cgtccgattc acccatgttt tctccagtga       240
     tttgatccgt gcaaaacaaa cagcgtgtgc catcatgagg aataaccaac tcagcgagga       300
     cattaaaatt atgtatgatc ccagactccg ggaaaggaaa tacggtgacg ccgagggtcg       360
     gcctctaagt gaactaaagg tgatggcaaa aaaagctgga ggtcagtgtc cgtcttatac       420
     cccaccagga ggagagaccc tagagcaggt tagagcttgt gccaaggact tcttcgaata       480
     tctttgccag ttagtgatgg cggaatcttc tgtaaaggag aagtcagaat taggtgcttc       540
     aggaatggtt gggatcatgt ctaccgacct ggcccctttt gtgaatcaca ataaggaacc       600
     tacaattttt ggggaaagta gagatgtcac tctagatgct agtgtgctgt tagtgagcca       660
     cggggcatat atgcgcaact ggatcaagta ttttgtggaa gacctgcaat tcactttccc       720
     accagagctg aagaagtctc gggaactttc cgtaagcccc aacacgggaa taagccattt       780
     tattgtcact gttggatcag gagcaactag gaaacctgag atccagtgtg tttgtatcaa       840
     tctccatggt cacctgtcag acattgatgc agacaccagc cattaccaag tatgattgaa       900
     cattaagggg cagatttgtc ggggcgtgag attgaggctc accacggaga aactcactca       960
     ctttctgttc attcctatgg gatttttaga atcctattta tcagtggaac tcaccatttg      1020
     ataaatacac tttcccatag gagtgaatag aaagtgggga tgcaccgaat cccggattca      1080
     gttcgggatt cggccttctt cagcaggatt aggtttcggc cgaatccttc tgcccggcct      1140
     aaccgaatcc gaatcttagt ttgcatatgc aaattagggg cgggtgggaa attgcgtgac      1200
     tttttgtcac aaaacaagta gtaaaaagta aatgttttcc ccttcccacc cctggtttgc      1260
     atatgcaaat tagggttcgg attcggtttg gtattcggcc aaatctttca agaaggattc      1320
     gggggttcgg ccgaatccaa aaaagtggat tcggtgcgtc cctaatagaa ggtgagtgag      1380
     tttttctgtg gtgagttttg gtctcacttt ttgataaatc tgcccccaac agtgtattct      1440
     ggcatcctta gctgaaatct tcgttaccca tttgctctca gaatagagtg cagattagtc      1500
     gggtagtaaa cctttaaata atgttttgag gcacatttat caaaggtcga atttcgaatt      1560
     catatgagtt tttaaaaact cccctaaact cccataaatt ttaccaatcg aaaagtattt      1620
     aaaaaaaaaa aaaaaaa                                                     1637
//