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EBI DbfetchID BC097526; SV 1; linear; mRNA; STD; VRT; 2636 BP. XX AC BC097526; XX DT 03-JUN-2005 (Rel. 84, Created) DT 03-JUN-2005 (Rel. 84, Last updated, Version 1) XX DE Xenopus laevis cDNA clone MGC:114648 IMAGE:5156161, complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-2636 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-2636 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-2636 RA Klein S., Gerhard D.S.; RT ; RL Submitted (01-JUN-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998N0211386Q. DR ImaGenes; IRAKp961I16229Q. DR ImaGenes; IRBHp990F0474D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Martha Rebbert, Steven L. Klein, Ph.D. CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 229 Row: i Column: 16 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis, Similarity but not identity to protein. XX FH Key Location/Qualifiers FH FT source 1..2636 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Emb1" FT /clone="MGC:114648 IMAGE:5156161" FT /tissue_type="Embryo, stage 10" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8355" FT CDS 138..2384 FT /codon_start=1 FT /product="Unknown (protein for MGC:114648)" FT /db_xref="GOA:Q4V863" FT /db_xref="InterPro:IPR001214" FT /db_xref="UniProtKB/Swiss-Prot:Q4V863" FT /protein_id="AAH97526.1" FT /translation="MGQTGKKSEKGAVCWRKRVKSEYMRLRQLKRFRRADEVKSMFNTN FT RQKIMERTEILNQEWKQRRIQPVHIMTTVSSLRGTRECFVTSDLDFPKQVIPLKTLTAV FT ASMPIMYSWSPLQQNFMVEDETVLHNIPYMGDEVLDQDGTFIEELIKNYDGKVHGDREC FT GFINDEIFVELVNALAQYSDYEDDEDGEDNQDDERDDITKDQDDNMEEKETLPLRKFPS FT DKIFEAISSVFPDKGTSEELKEKYKELTEQQLPGALPPECTPNIDGSNAKSVQREQSLH FT SFHTLFCRRCFKYDCFLHPFHATPNTYKRKNNEAANDGKLCGPYCYQLLEGAREFAAAL FT TAEIIKTPPKRPSGRRRGRLPNNSSRPSTPTVNVLEAKDTDSDREAGTETGGESNDKEE FT EEKKDETDSSSEANSRCQTPIKMKPNIEPPENVEWSGAEASLFRVLIGTYYDNFCAIAR FT LISTKTCRQVYEFRVKESSIIAPVIAEDVDTPPRKKKRKHRLWAAHCRKIQLKKDGSSN FT HVYNYQPCDHPRQPCDSSCPCVIAQNFCEKFCQCSSDCQNRFPGCRCKAQCNTKQCPCY FT LAVRECDPDLCLTCGAADHWDSKNVSCKNCSIQRGSKKHLLLAPSDVAGWGIYIKDPVQ FT KNEFISEYCGEIISQDEADRRGKVYDKYMCSFLFNLNNDFVVDATRKGNKIRFANHSLN FT PNCYAKVMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQADALKYVGIEREMEIP" XX SQ Sequence 2636 BP; 864 A; 509 C; 624 G; 639 T; 0 other; gaacgctgtg agaggtggag gtttatttgg gatatttagt ttggcggtag tgggattcca 60 tcggtaagga gattccggta ggaagtacgg agaagcagag ccaggcgaag gggaggcggt 120 cacagacaag gataatcatg ggccagacag gcaagaaatc tgagaaggga gcggtgtgtt 180 ggcgcaagcg ggtgaaatcg gagtacatgc gcttaaggca actcaagaga tttagacgag 240 cagatgaagt aaagagcatg tttaacacaa atcgtcaaaa gataatggaa cgaactgaga 300 ttttaaatca agagtggaaa cagcgcagaa tccagcctgt gcacataatg actacagtca 360 gttctttaag agggactaga gagtgctttg tgactagtga tttagatttc ccaaaacaag 420 ttataccttt gaaaacactc actgctgtag cctctatgcc tattatgtat tcctggtctc 480 ctcttcagca gaatttcatg gtggaagatg aaactgttct gcataatatt ccatatatgg 540 gtgatgaggt tttggaccaa gatgggacat ttattgaaga actcattaaa aactatgatg 600 gaaaagttca tggagacaga gaatgcggtt tcattaatga tgagatattt gtggagttag 660 tcaatgcatt ggcacaatac agcgattatg aagacgatga agatggagag gataatcaag 720 atgatgagag ggatgacata acaaaagatc aggatgataa catggaggaa aaggaaactc 780 tgcctctcag gaaatttccc tctgataaaa tttttgaagc aatatcctca gtgtttccag 840 acaagggtac atctgaagaa ctgaaagaaa aatacaagga attaacagaa caacaacttc 900 caggggcact tcctccagag tgcaccccaa atatagatgg atcaaatgca aaatctgtac 960 aacgagaaca gagtcttcat tcattccata ccttgttttg tcggcgatgt tttaagtatg 1020 attgtttttt gcacccattt catgcaactc ctaatactta caaaaggaag aacaatgaag 1080 cagctaatga tggaaaactt tgcggaccat actgctacca gcttttggaa ggagcacggg 1140 agtttgctgc agctttgaca gcagaaataa taaagacacc accaaagcga cccagtggtc 1200 gccgaagagg tagacttccc aacaacagca gcagaccaag caccccaact gtaaatgtgt 1260 tagaagccaa ggacacggat agcgaccgag aagctggaac tgaaactgga ggggaaagca 1320 atgataagga ggaagaagag aaaaaagatg agaccgacag ctcctctgaa gcaaactccc 1380 gttgccaaac accaataaaa atgaagccaa atattgagcc acctgaaaat gtggaatgga 1440 gtggagcaga ggcctcccta tttcgagtgc taattggaac ctattatgac aacttctgtg 1500 caattgcaag attgatcagt accaagacat gccggcaagt ctatgagttc agagtaaagg 1560 aatccagtat tatcgctcct gttattgctg aggatgttga cactcctccg agaaagaaaa 1620 agaggaaaca caggctttgg gcagcacact gcaggaaaat tcaactgaaa aaagatggtt 1680 cttcaaacca tgtttacaat taccagccat gtgatcaccc ccgccagccc tgtgacagct 1740 catgcccctg tgtcatagcc cagaactttt gtgagaagtt ctgtcagtgc agctctgact 1800 gccaaaacag gttccctgga tgccgctgta aagcacagtg caatacaaag cagtgccctt 1860 gctacctggc tgtacgggag tgtgacccag acctgtgctt gacttgtggg gctgccgatc 1920 actgggacag taagaatgta tcctgcaaga actgcagcat tcagcgcggc tccaagaagc 1980 atttgctatt ggctccttct gatgttgctg gctgggggat atatatcaaa gatcctgtac 2040 agaaaaacga gttcatctcg gaatactgtg gagagatcat atcccaggat gaagctgatc 2100 gaagagggaa ggtgtatgat aaatatatgt gtagcttcct cttcaacttg aacaatgatt 2160 ttgtagtaga tgcaacacgg aaaggcaaca agatccgatt tgcaaaccat tctctgaatc 2220 caaactgcta tgcaaaagta atgatggtta atggagacca tagaataggc atttttgcga 2280 agagagccat tcagacgggt gaagaactct tctttgatta cagatacagc caagcagatg 2340 ccctgaaata tgtgggtatt gagagagaaa tggaaatccc ctgattctag ctacctcctt 2400 gtgaacccca tgccttacct tcttcaggaa tttcttatgc gcaactttag atacaaagat 2460 gggaagaaaa ttcaagctga agttacagag tactgtaacc tttaatttat agtgatctga 2520 ccacaatgca agtctttcct ttgccggttg taattgtctt ttgtacaatg atgttattca 2580 ggtacatgtc ccacctcaaa taaaatatac ttgaacttca aaaaaaaaaa aaaaaa 2636 // |
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