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EBI DbfetchID BC097408; SV 1; linear; mRNA; STD; ROD; 1377 BP. XX AC BC097408; XX DT 03-JUN-2005 (Rel. 84, Created) DT 18-JUL-2006 (Rel. 88, Last updated, Version 7) XX DE Rattus norvegicus similar to calmegin, mRNA (cDNA clone MGC:114453 DE IMAGE:7454086), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-1377 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1377 RG NIH MGC Project RA ; RT ; RL Submitted (01-JUN-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000022021. DR Ensembl-Gn; ENSRNOG00000003695; Rattus_norvegicus. DR Ensembl-Gn; ENSRNOG00000005424; Rattus_norvegicus. DR Ensembl-Gn; ENSRNOG00000006056; Rattus_norvegicus. DR Ensembl-Gn; ENSRNOG00000007338; Rattus_norvegicus. DR Ensembl-Gn; ENSRNOG00000007378; Rattus_norvegicus. DR Ensembl-Gn; ENSRNOG00000007895; Rattus_norvegicus. DR Ensembl-Gn; ENSRNOG00000008075; Rattus_norvegicus. DR Ensembl-Gn; ENSRNOG00000013216; Rattus_norvegicus. DR Ensembl-Gn; ENSRNOG00000014296; Rattus_norvegicus. DR Ensembl-Gn; ENSRNOG00000014462; Rattus_norvegicus. DR Ensembl-Gn; ENSRNOG00000026128; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000004982; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000007259; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000008173; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000009696; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000010260; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000010545; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000011336; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000017960; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000019406; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000019594; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000031371; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000037256; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000039857; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000060408; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000068301; Rattus_norvegicus. DR ImaGenes; IMAGp998P2015713Q. DR ImaGenes; IRAKp961D04227Q. DR ImaGenes; IRBPp993H0641D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Howard Jacobs CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 227 Row: d Column: 4 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 71043835. XX FH Key Location/Qualifiers FH FT source 1..1377 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_238" FT /clone="MGC:114453 IMAGE:7454086" FT /tissue_type="Testis, rat (Brown Norway)" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..1377 FT /gene="RGD1310572" FT CDS 75..1193 FT /codon_start=1 FT /gene="RGD1310572" FT /product="similar to calmegin" FT /db_xref="GOA:Q4V8F8" FT /db_xref="InterPro:IPR006759" FT /db_xref="UniProtKB/Swiss-Prot:Q4V8F8" FT /protein_id="AAH97408.1" FT /translation="MKTKNVNLLFALVAVLLFGFSCFCISRMNQTNNQLINCRNHVLEF FT KETMLRLKNKSENNHQNLVKVLHQLKHKVAPAKPSGSILEKKVNMLDQDETVFNQFEVL FT KFFLPHLRTAGNIYPDIAIGRQRAGVSFALGITTIDRGNHTYLKQTLTSVLSRMTPEEE FT EDSVVIVSVADTDENYLKSVVHMVKTRFRKQVQSGALEVISIPALFYPQTLLEKKTTKN FT AKNWQIKQVLDFCILMLYAQPKATYYLQLEDDIVAKKMYFTKMKDFVNSVTSKDWFYIE FT FSVLGFIGKLFRSKDLMDFVHFFLIFYRAKPIDVLLDDIALLRMCSFGGPLRSCLQLKR FT EVRVQYKPSLFQHVGTHSSFPGREQHLKDHYY" XX SQ Sequence 1377 BP; 445 A; 280 C; 276 G; 376 T; 0 other; ctggacagcc taggtgtgaa gcctggagtt ggcggtgaca cctgttcacc tccactggct 60 ctgacgccag cgcaatgaag accaagaacg ttaacttgct cttcgctctc gttgctgtcc 120 tgctctttgg cttctcgtgt ttctgcatct ccaggatgaa ccaaaccaat aatcagctaa 180 ttaactgcag aaaccacgtt ttggagttca aggaaactat gctacgttta aaaaacaaaa 240 gtgaaaataa tcaccaaaat ctagtgaaag tcctccatca actgaagcat aaagtggccc 300 cagcgaagcc gtcaggaagc atccttgaga agaaagtgaa catgttggat caggatgaaa 360 cagtttttaa ccaatttgaa gtcttaaagt tcttccttcc tcacctaagg acagcaggga 420 acatttaccc ggatatagcc attggcagac agagagcagg cgtctctttt gcactgggaa 480 tcaccaccat tgacagaggg aatcacacct acctgaagca aacgctgact tctgttctct 540 ccagaatgac tcctgaagaa gaggaggact ccgtggtgat cgtctctgtg gctgatactg 600 atgaaaatta tttaaaatct gttgttcaca tggttaaaac cagattcaga aagcaagtac 660 agtccggagc tttggaggtc atttcaatac ctgccctttt ttaccctcaa acattactgg 720 aaaagaaaac aacgaagaat gcaaaaaatt ggcagataaa acaagtattg gatttttgta 780 ttctgatgtt gtacgcacaa cccaaggcca cgtattattt acagctggaa gatgatatcg 840 tagcaaaaaa gatgtatttt acaaaaatga aagattttgt aaatagtgtc acttcaaaag 900 attggtttta tattgagttt tcagtccttg gatttatagg gaaactcttt cgatcgaagg 960 acctgatgga ctttgtgcat tttttcttga tattctacag agcaaagccc atagatgtgc 1020 ttttagatga cattgccctg cttcggatgt gcagcttcgg ggggcctctg aggagctgtt 1080 tgcagctaaa gagggaagtt cgagttcagt acaaaccatc tctgttccag catgtgggca 1140 ctcactcatc atttccagga cgagaacagc acctcaagga tcattactac taggattttc 1200 ctaaatctta caacttctcc aaaaattgcc agactcattt ttgggaaaaa ggcacagcaa 1260 atatcaaatt ttctccagtt acattgaaga agagactaca ctattttttt ttaaattaaa 1320 ccttcagtaa taaagtgagt ataaaaattt aaaaaaaaaa aaaaaaaaaa aaaaaaa 1377 // |
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