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EBI DbfetchID BC097364; SV 1; linear; mRNA; STD; ROD; 1438 BP. XX AC BC097364; XX DT 03-JUN-2005 (Rel. 84, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 6) XX DE Rattus norvegicus ubiquitin-conjugating enzyme E2L 6, mRNA (cDNA clone DE MGC:114397 IMAGE:7443068), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-1438 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1438 RG NIH MGC Project RA ; RT ; RL Submitted (01-JUN-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000017917. DR Ensembl-Gn; ENSRNOG00000030467; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000044319; Rattus_norvegicus. DR ImaGenes; IMAGp998I1815740Q. DR ImaGenes; IRAKp961N17227Q. DR ImaGenes; IRBPp993E0943D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Josef Lazar, Dr. Howard J. Jacob, Medical CC College of Wisconsin CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 227 Row: n Column: 17 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 67078501. XX FH Key Location/Qualifiers FH FT source 1..1438 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_270" FT /clone="MGC:114397 IMAGE:7443068" FT /tissue_type="Placenta, day 21 of pregnancy, pooled 2." FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..1438 FT /gene="Ube2l6" FT CDS 467..928 FT /codon_start=1 FT /gene="Ube2l6" FT /product="ubiquitin-conjugating enzyme E2L 6" FT /db_xref="GOA:Q4V8J2" FT /db_xref="InterPro:IPR000608" FT /db_xref="UniProtKB/Swiss-Prot:Q4V8J2" FT /protein_id="AAH97364.1" FT /translation="MTASKRVAKELDDLSKELPPYLRHLSSDDANVLVWHMLLLPDQLP FT YRLKAFGLRIDFPREYPLKPPTLRFTTKIYHPNISEDGLVCLPLISTENWKPYTKAYQV FT LEALNILVSRPNLEEPVRLELADLLTQDPEMFRKKAEEFTLQYGVDRPS" XX SQ Sequence 1438 BP; 367 A; 361 C; 375 G; 335 T; 0 other; cacagttaag ggagcggtcc ttggagggca taaagtctac actgatcccc aatctctttt 60 aggatggggt actagaccca caaaggcaaa gtgatttggc ccaggactct gagaatttct 120 ctagaggtgg gggttaggtc cacaatctca ctgagagagc ctgcagcaga gttactttgc 180 agcggcgtcg ggggagctga cagaggctag ggatgaaccc catcccagct cctgcctgat 240 gtactctacg agatgcagga accacagacg tagtctctga tctgcaaaga gcttgagttt 300 cttggattta agaccgccaa gctgggcact ccgcagcctc cacgtatccc tcgaagaagt 360 gggaagcagg tctttacagc tggagcccgt gtaggtggag cagagcgtgg gcggggctca 420 ggatcgtccg gcaagaatct gctgctgccc cacgctccaa cctgagatga cggccagcaa 480 gcgagtggct aaagagctgg acgatctttc gaaggagctt ccgccatacc tgcgccacct 540 gtctagcgat gatgccaatg tgctggtgtg gcacatgctc ctgctgccag accaacttcc 600 ctatcgcctc aaggccttcg gtctgcggat tgatttcccc agggagtatc cacttaagcc 660 tcccactttg agattcacca ccaagatcta ccaccccaac atcagtgagg atggactggt 720 gtgccttccc ctcatcagca ctgagaactg gaaaccttac accaaggcct atcaagtctt 780 ggaggccctc aacatactgg tgagtagacc gaatctggaa gaacctgtgc gtttggaact 840 agctgacctc ctgactcagg acccggagat gttcaggaag aaggcagaag agttcaccct 900 tcaatatgga gtggaccgac cctcttaatt ctggttctga agcctctctc cctggatctt 960 ctgtggatgg atatcacagg aaggccatcc tgtgccgaag gtttcctttg tattgctaat 1020 tatgaatatt gtgcccagtg tgtatgtatg tgttgggggg aactgtgtgg tgggtactcc 1080 ttcctggagt catctggctg tagatgtacc attcccacgt cctcggtggc tccaaagcca 1140 gtggacggac gttaggtatg cacagtttca ggcctgcttt ctagataatc catcttaggt 1200 caccttcagg tcaattggca gaaaattgaa tgccccaggg cctgggcacc aaggggtgag 1260 aaggcaggac tctgcttgga agacagggcc tccagaaggt gccggattta ctgctgagtg 1320 attgaaatca accccattgt aattgaaaac gttaaacatt ttattttctg ttgatgactc 1380 acaaaataaa gtaactaacc tccacccaga aaaaaaaaaa aaaaaaaaaa aaaaaaaa 1438 // |
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