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EBI DbfetchID BC097218; SV 1; linear; mRNA; STD; VRT; 1081 BP. XX AC BC097218; XX DT 03-JUN-2005 (Rel. 84, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 6) XX DE Danio rerio zgc:114168, mRNA (cDNA clone MGC:114168 IMAGE:7429811), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1081 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1081 RG NIH MGC Project RA ; RT ; RL Submitted (01-JUN-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000043492; Danio_rerio. DR Ensembl-Tr; ENSDART00000019831; Danio_rerio. DR ImaGenes; IMAGp998A0915667Q. DR ImaGenes; IRAKp961E14226Q. DR ImaGenes; IRBOp991F0167D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: William S. Talbot, Stanford University CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 226 Row: e Column: 14 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 66910505. XX FH Key Location/Qualifiers FH FT source 1..1081 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_19" FT /clone="MGC:114168 IMAGE:7429811" FT /tissue_type="Larvae, whole, 5 day old, mixed wild type, FT 650 pooled" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..1081 FT /gene="zgc:114168" FT CDS 37..873 FT /codon_start=1 FT /gene="zgc:114168" FT /product="zgc:114168" FT /db_xref="GOA:Q4V8T0" FT /db_xref="InterPro:IPR007828" FT /db_xref="UniProtKB/Swiss-Prot:Q4V8T0" FT /db_xref="ZFIN:ZDB-GENE-050913-113" FT /protein_id="AAH97218.1" FT /translation="MGPDPSLAYRPECHEKDKTEFRNFENGDLFDRVFNTYKLMHTHQT FT LDFVKQKHQVWSNCSHFSLSMMDSIDSLDELVDESDPDVDFPNSFHAFQTAEGIRREHP FT DKDWFQLVGLIHDVGKVMALYSEPQWAVVGDTYPVGCKFQNSIVFRNSTFEGNPDGKNP FT APNTEFGIYEPQCGLDKVLMSWGHDEYLYRVMKFNKCTIPEEGLYMIRFHSFYPWHSNG FT DYMHLCNEKDQQMLPWVKEFNKFDLYTKSTELPDVERLKPYYQSLIDKYCPGVLQW" XX SQ Sequence 1081 BP; 360 A; 227 C; 242 G; 252 T; 0 other; cacactgaag cacagctcaa catgagggtg gtaaacatgg gtccagaccc ctctttggca 60 tatcgacctg aatgtcatga gaaagacaaa actgaattta ggaactttga gaatggagat 120 ctgttcgacc gagtgtttaa cacatacaag ctgatgcaca cacaccaaac gctggacttt 180 gtcaagcaaa agcaccaggt gtggtcgaac tgcagtcact tcagcttgtc catgatggac 240 agcatcgact ccctggacga gctggtggat gaatccgacc ctgatgttga ctttcccaac 300 tccttccatg cgtttcagac ggccgaggga atccgcagag agcatcctga taaagactgg 360 tttcagctag ttggtctgat ccatgatgtt ggaaaggtca tggccttgta tagcgagccg 420 cagtgggctg tagttggaga cacataccca gtgggatgca agttccagaa ttcaatagtg 480 ttcagaaact caacatttga aggcaatcca gatggaaaga accctgcacc caacacagaa 540 tttgggattt atgaacccca atgtggcctt gataaggtgc tgatgtcttg gggacatgat 600 gagtatctat accgggtcat gaagttcaac aaatgcacaa tacctgagga gggtctttac 660 atgatccgtt tccactcctt ctacccctgg cattcaaacg gcgactacat gcacttatgc 720 aacgaaaaag accagcaaat gctgccctgg gtcaaagagt ttaacaagtt tgatttgtac 780 accaagagca ctgaactacc agacgtggag aggctgaagc cgtattatca gtctctcatt 840 gataagtact gccctggggt actgcagtgg taaatgtgtg ccgtaattct gtgaatccat 900 ccaattccag tgacacacac tcatttgtaa atactaaatg atgagtgaat catgtgggtt 960 tggtgaaaat gctagcacta tatagatgtt ctgaatgaaa attaaaagac cactgaaagc 1020 tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1080 a 1081 // |
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