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EBI DbfetchID BC095667; SV 1; linear; mRNA; STD; VRT; 2554 BP. XX AC BC095667; XX DT 10-MAY-2005 (Rel. 83, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 8) XX DE Danio rerio zgc:112079, mRNA (cDNA clone MGC:112079 IMAGE:7415851), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2554 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2554 RG NIH MGC Project RA ; RT ; RL Submitted (06-MAY-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000005567; Danio_rerio. DR Ensembl-Gn; ENSDARG00000010941; Danio_rerio. DR Ensembl-Gn; ENSDARG00000034300; Danio_rerio. DR Ensembl-Gn; ENSDARG00000037362; Danio_rerio. DR Ensembl-Tr; ENSDART00000002104; Danio_rerio. DR Ensembl-Tr; ENSDART00000010739; Danio_rerio. DR Ensembl-Tr; ENSDART00000021857; Danio_rerio. DR Ensembl-Tr; ENSDART00000054366; Danio_rerio. DR ImaGenes; IMAGp998K1715630Q. DR ImaGenes; IRAKp961M08224Q. DR ImaGenes; IRBOp991D0166D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: John Postlethwait, University of Oregon CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 224 Row: m Column: 8 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 63101979. XX FH Key Location/Qualifiers FH FT source 1..2554 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_5" FT /clone="MGC:112079 IMAGE:7415851" FT /tissue_type="Ovary" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..2554 FT /gene="zgc:112079" FT /note="synonyms: ago61, im:7153239" FT CDS 272..2002 FT /codon_start=1 FT /gene="zgc:112079" FT /product="zgc:112079" FT /db_xref="GOA:Q5NDE5" FT /db_xref="InterPro:IPR003961" FT /db_xref="InterPro:IPR008957" FT /db_xref="UniProtKB/Swiss-Prot:Q5NDE5" FT /db_xref="ZFIN:ZDB-GENE-050522-242" FT /protein_id="AAH95667.1" FT /translation="MNLPAVLNGLLVSVVAALLWKYVRLVEHTSQLEEELQLTRQSQEF FT SQVRIDYHGALLALQEHGTRMVCTGKMHTDRICRFDYLCYCTEAEEFVFFHSNASVMLP FT NLGSRRFQPALLDLSSVEDHNTQYFNFLELPAAALKFMPKPVFVPDVTLILNRFNPDNL FT MHIFHDDLLPVYYTMQQYSDLDDEARLVFMEGWGEGAHFDLYRLLSSKQPLLKDQLKTF FT GKLMCFTKSYVGLSKMTTWYQYGFVQPQGPKANILISGNEIRQFASFLMERLNITREEE FT DDDYIVVFKRTTNRLILNEAELLLALAQEFQMRTVTVSLEEQSFDNIIQIISRAAMLVS FT MHGAQMITSMFLPRGAAVVELFPYGVNPEQYTPYKTLASLPGMDLQHVAWRNTMEENTV FT TFPDRPWDQGGIVHLEKEEQERILASKEVPRHLCCRNPEWLFRIYQDTTVDLASFLDVL FT RDGLKKLNLKKAKVASTVHPGRVREPKCQTSVQATNEAKLSVSWQIPWNLKYLKVKEVK FT YEVWIQEQGENTYMPYILPHQNYTFSENIKPFTTYLVWVRCIFNKNLLGPFADVLICKT FT " XX SQ Sequence 2554 BP; 690 A; 581 C; 589 G; 694 T; 0 other; gcgctacgta acggtaaaat taagccgata ttcaatcgtt gaaccacatt gttgaatgaa 60 cacttcgcgg gattaacaca gtaagctcag aaatgccgcg tttgtccgct gtaaagttgt 120 aaatggtcac agccactgat ttgctggagc tgctgtagaa acagtgtatc cgcagtgaat 180 tcacaccgtt tcgtcctgtc tcacctttcc cacaggtgga gcatgagtgt gggatcggag 240 ttctgctgtg atgcgtgcta tcgggtgtag gatgaacctg ccggcagtgc tgaatggcct 300 gctggtgtca gtggtggcag ccttgctttg gaaatacgtt cgtctggttg aacacacatc 360 acagctggaa gaggagctac agcttacacg ccagtcacaa gaattttcac aggtgcgtat 420 cgattaccat ggtgccttgt tggcactcca agagcatggg accagaatgg tctgcactgg 480 caagatgcac actgatcgca tctgccgttt tgactacctc tgctactgca cagaagctga 540 ggagtttgta ttcttccaca gtaatgcctc tgtgatgttg cccaaccttg gctctcgccg 600 tttccaacca gccctgctgg acctctcatc tgtagaagac cacaacacgc aatattttaa 660 ctttctcgag cttccagcgg cggctctgaa atttatgcca aaacctgtgt ttgtgccaga 720 cgtcactctt attctgaatc gattcaatcc agacaacctc atgcacattt tccacgatga 780 tcttttgccg gtctactaca ccatgcagca gtattcagac ttggacgatg aagccagact 840 cgtcttcatg gagggttggg gtgaaggggc tcacttcgac ctctatcgct tgctaagcag 900 caagcaacca cttctcaagg accagttgaa gaccttcggc aagctcatgt gcttcaccaa 960 gtcctacgta ggactgtcaa agatgaccac atggtaccag tatggctttg tgcaacccca 1020 aggacccaaa gccaacattc tgatatcagg taacgagatc cgtcagtttg cttcatttct 1080 gatggagagg ctgaacatca caagagagga ggaggatgat gactacattg tagtttttaa 1140 acgtaccacg aacaggctca tcctgaacga ggccgagctg cttctggctt tagctcaaga 1200 gtttcagatg aggacggtca ctgtgtcttt ggaggagcag tcgtttgata acatcatcca 1260 aattattagc agagcagcca tgctggtcag catgcacgga gcccagatga tcacctccat 1320 gtttttgccc cgtggtgcag ctgtggtcga actcttccct tatggtgtga acccggaaca 1380 gtacactccc tacaaaacct tggcctcctt acctggcatg gacttacagc atgttgcctg 1440 gagaaatacc atggaagaga acactgtcac tttccctgat cgcccttggg atcagggtgg 1500 catcgttcat ttggagaagg aggagcaaga acgtatcctt gccagcaagg aggtgccaag 1560 acatctttgt tgtcgtaatc cagaatggct ttttcgcatt taccaggaca ccactgtaga 1620 tcttgcctct ttcctggacg tactcagaga tggtctgaaa aagcttaacc tcaaaaaggc 1680 taaggtggct agcactgtac atcccggtcg agtccgagag cccaagtgcc agacttcagt 1740 gcaggccacc aatgaagcaa agctctcggt ttcatggcag atcccttgga acctgaagta 1800 cctgaaggtc aaagaggtga aatatgaggt gtggatccag gaacagggag agaacacgta 1860 tatgccttac attctgcccc accaaaacta caccttttca gagaacatta aaccattcac 1920 cacatattta gtgtgggtgc gctgcatctt taacaagaac ctcttgggcc catttgcaga 1980 tgttcttata tgtaaaactt gattcagcaa tccggttaaa tgtatcacta cattgtagtc 2040 agctagtgga gaattaattg gaaggttcgt tctcaggagc tgtcctgaaa ttgacatgat 2100 gtgacacagg tgaattgttt ctttgaacct tgattgtcgc tgattgctct tcgtggtact 2160 tgtggagtgt cacgaactaa ttgagaatca tgaccacggt gaaggctggc catgaatgca 2220 gtttttagaa ttgctagacc ttttaataca tcacagttca agcaaagttc ttaactttat 2280 ttatcagaaa tgtattgcat aacttaaatt cgtatttata agtccaagac actggttttg 2340 tcgacacctg tttctgttaa ctgaaatact acacactttt ctgtggctta aacaagcttt 2400 gtgacttcgt gagtgtgccc ttaagttttt gttatgatga agccttttgg aggtttagaa 2460 atcttatatg aagtaactac aaaacaaact gaaagtgaat attaatatat aaaaagtagg 2520 ctgctgttta aaaaaaaaaa aaaaaaaaaa aaaa 2554 // |
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