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EBI DbfetchID BC095649; SV 1; linear; mRNA; STD; VRT; 2625 BP. XX AC BC095649; XX DT 10-MAY-2005 (Rel. 83, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 9) XX DE Danio rerio zgc:112030, mRNA (cDNA clone MGC:112030 IMAGE:7408358), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2625 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2625 RG NIH MGC Project RA ; RT ; RL Submitted (06-MAY-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000006215; Danio_rerio. DR Ensembl-Gn; ENSDARG00000016607; Danio_rerio. DR Ensembl-Gn; ENSDARG00000020876; Danio_rerio. DR Ensembl-Gn; ENSDARG00000030961; Danio_rerio. DR Ensembl-Gn; ENSDARG00000056001; Danio_rerio. DR Ensembl-Gn; ENSDARG00000069298; Danio_rerio. DR Ensembl-Gn; ENSDARG00000071014; Danio_rerio. DR Ensembl-Gn; ENSDARG00000077139; Danio_rerio. DR Ensembl-Gn; ENSDARG00000079905; Danio_rerio. DR Ensembl-Tr; ENSDART00000008010; Danio_rerio. DR Ensembl-Tr; ENSDART00000014721; Danio_rerio. DR Ensembl-Tr; ENSDART00000018261; Danio_rerio. DR Ensembl-Tr; ENSDART00000040754; Danio_rerio. DR Ensembl-Tr; ENSDART00000043096; Danio_rerio. DR Ensembl-Tr; ENSDART00000044294; Danio_rerio. DR Ensembl-Tr; ENSDART00000100727; Danio_rerio. DR Ensembl-Tr; ENSDART00000104733; Danio_rerio. DR Ensembl-Tr; ENSDART00000113176; Danio_rerio. DR Ensembl-Tr; ENSDART00000114057; Danio_rerio. DR ImaGenes; IMAGp998C1215611Q. DR ImaGenes; IRAKp961I05224Q. DR ImaGenes; IRBOp991A0965D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: John Ngai, Nancy Freeman, NIDCD CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 224 Row: i Column: 5 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 63101971. XX FH Key Location/Qualifiers FH FT source 1..2625 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_14" FT /clone="MGC:112030 IMAGE:7408358" FT /tissue_type="Olfactory epithelium" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..2625 FT /gene="zgc:112030" FT /note="synonym: MGC112030" FT CDS 136..1596 FT /codon_start=1 FT /gene="zgc:112030" FT /product="zgc:112030" FT /db_xref="GOA:Q502L7" FT /db_xref="HSSP:1ZIN" FT /db_xref="InterPro:IPR000850" FT /db_xref="InterPro:IPR007862" FT /db_xref="UniProtKB/Swiss-Prot:Q502L7" FT /db_xref="ZFIN:ZDB-GENE-050522-275" FT /protein_id="AAH95649.1" FT /translation="MDSAERPLRIPPEMVIYAEKHDIFHLIQTLVRNLMVDKPDDPIQY FT LINFLERDNVDVPRIILLGPPASGKKTVAKKLCEHTQAIHITFCDILKDDSDLTRAAQS FT YYDKKQNVPKDLWIQLIQQRLSKPDCVQRGWVLEAIPKTQDEALCLQEAGITPDHVVML FT EAPDVVLIERSSGKRIDPVTGDVYHVTFMWPESEEVAQRLETPRTLMPVQVMSQKLQKY FT HTEAHALKRTYHNCLKIINADQPHVDVFSQVLNFICTPRHSPSPYTPRILLFGPPGAGR FT NLQAKLIAQKYGIINICCGELLKAVSADESHMGELIKPYLESEQQVPSSIVLRVLTERL FT SRMDCTARGWVLHGFPRDVEEAELLHKSNFTPNRVFFLEITDDIAIERLALRAVDPVTG FT EWYHSVYKPPPGPEVQARLRFNPQHSEAQLLMRLKEYWSQTVRLQAFYPQAVYINADQD FT PHTVFESLESRLVGQLPKVLSNQQTNEN" XX SQ Sequence 2625 BP; 851 A; 541 C; 535 G; 698 T; 0 other; accaagggca acgacagcaa cagctgcagt gagaacgcaa aacaaactag ccacagctaa 60 cgttagccta catttcaaga cacattttta gccttccttt gctgacctct cggtgtctcg 120 tggagcattg cagtgatgga ttcagctgaa aggcccctca gaatcccccc tgaaatggtc 180 atttatgcag agaaacatga catatttcac ctgatccaga cactagtgag aaatctgatg 240 gtggacaaac cagatgatcc cattcaatac ctgattaact ttctggaaag ggacaatgtt 300 gatgttccta gaatcatatt actgggtcct ccagcatcag ggaaaaaaac tgtagctaaa 360 aagttatgcg agcacacaca ggctatccat ataacttttt gcgatatttt aaaagatgac 420 agtgacctga caagggctgc acagagttat tatgacaaaa aacagaatgt ccccaaagac 480 ctctggatcc aattgattca acaacgtcta tcaaaacctg actgtgttca gcggggctgg 540 gttttggaag ccattcccaa gacgcaagac gaggcactat gtctacaaga agcaggcatc 600 accccagatc acgttgtgat gctggaagct cctgatgtcg tcctgattga aaggagctca 660 ggcaagagga tagaccctgt cacaggagat gtatatcatg tcaccttcat gtggcctgag 720 agtgaagagg ttgcacagcg tttagaaaca cccaggactc ttatgccagt tcaagttatg 780 agccaaaagc tgcagaaata ccacacagaa gctcacgctc tgaagcgcac ctaccacaac 840 tgcctgaaga tcatcaatgc tgaccagcct catgtagatg tattttcaca agtgctgaac 900 ttcatctgta ctccacgtca ctctccctca ccctacactc ccagaatcct gctgtttgga 960 ccaccaggtg caggaagaaa tctgcaggca aaactaattg ctcagaaata tggcatcatc 1020 aacatttgtt gtggtgagct tctgaaggct gtgtcagctg atgagagcca tatgggggag 1080 ctcattaaac cgtacctgga gtcagaacag caagtgccgt ccagtatagt tctgcgggtc 1140 cttacagaga gactgagcag aatggattgc accgcacggg gctgggtgct tcatggcttt 1200 cctcgagatg ttgaagaggc agaacttctc cacaagtcta atttcacacc aaacagggtt 1260 ttcttcttgg agataactga tgacatcgct atcgaaaggc tagcacttag ggctgtggat 1320 cctgtgacag gagaatggta ccacagcgtg tataaacctc ctcctggtcc ggaagttcaa 1380 gcacggcttc ggtttaaccc acagcattca gaggcacagc tgttaatgag gcttaaggaa 1440 tactggagcc aaacagtgcg cctgcaggcc ttctacccac aggcagtgta catcaacgct 1500 gaccaggacc cacacactgt gtttgagtca ctggagagtc ggctagtggg ccaactacct 1560 aaagtgctgt ctaaccagca aacaaatgag aactaatgct cttgaaacac ttcaaaaaag 1620 agatacacca cccaaaaact gaagacttgt gtaatcacaa attgtttgac ttatggaaca 1680 caaatataga tttaaaaata gagcaatttg aaaatccaaa cagtggatga acttaaaata 1740 aacttgcaaa aagtaacaat ggtaatctaa aatctttaga tgttgacttg aaaaaggaaa 1800 actaatatta ttatttttag ttttacacta taaactattt ctttcaactt ttgcaaattt 1860 gacgtttgac atagagatta gcacaatgtg aaagaaggta tgtgacagta tagaggtgct 1920 gtatgacatt tcttttgtga gtttcactta catgagtctt cataacatac taatgtttag 1980 gtcaaatgtg aaatcacagt atcatcaact tattagtgga aaagtggcac attcatccac 2040 tgttgtttgt actaaaatga aggattttcc taaataaaat acatttgtct agcccggcct 2100 ctgaacatag ccatcactgg ggtcataacc cattataata aaatgtatga acgagttgtt 2160 ctctaaatta tcctctaaat aaaagcagtc atgaattgct gtgggatcac aatggaagtc 2220 acatgacagt tgcctgaaaa tgatggtata tagaggaaaa aaatgaaggt cttggtgttt 2280 ttattacaca cagttatcat ttcaaaaggc actgattaat ctacttaggt tatagatgta 2340 ttaatgccat gttggtttag tgtggtttaa agtatctgtc caaaaattct aaaaatccaa 2400 acggaaagaa gcttatttac atatgggact gcatgaaagg tgattaaaat aatttttggg 2460 tggattatct ctttaatcat tcacacaggt caattttaat accaattctt taacaataca 2520 taatgcaaaa gtttgatagg ctactaaaaa tctgcttatg aacttgtctt ggtcttagct 2580 ctaatttaat aaacactaac atgtctccaa aaaaaaaaaa aaaaa 2625 // |
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