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EBI DbfetchID BC095104; SV 1; linear; mRNA; STD; VRT; 962 BP. XX AC BC095104; XX DT 10-MAY-2005 (Rel. 83, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 3) XX DE Danio rerio zgc:109981, mRNA (cDNA clone MGC:109981 IMAGE:7274048), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-962 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-962 RG NIH MGC Project RA ; RT ; RL Submitted (06-MAY-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000009311; Danio_rerio. DR Ensembl-Gn; ENSDARG00000030012; Danio_rerio. DR Ensembl-Gn; ENSDARG00000055974; Danio_rerio. DR Ensembl-Gn; ENSDARG00000060879; Danio_rerio. DR Ensembl-Gn; ENSDARG00000061473; Danio_rerio. DR Ensembl-Gn; ENSDARG00000069326; Danio_rerio. DR Ensembl-Gn; ENSDARG00000076586; Danio_rerio. DR Ensembl-Tr; ENSDART00000023196; Danio_rerio. DR Ensembl-Tr; ENSDART00000055606; Danio_rerio. DR Ensembl-Tr; ENSDART00000075652; Danio_rerio. DR Ensembl-Tr; ENSDART00000078382; Danio_rerio. DR Ensembl-Tr; ENSDART00000079689; Danio_rerio. DR Ensembl-Tr; ENSDART00000086215; Danio_rerio. DR Ensembl-Tr; ENSDART00000087696; Danio_rerio. DR Ensembl-Tr; ENSDART00000098356; Danio_rerio. DR Ensembl-Tr; ENSDART00000100779; Danio_rerio. DR Ensembl-Tr; ENSDART00000100782; Danio_rerio. DR Ensembl-Tr; ENSDART00000101577; Danio_rerio. DR Ensembl-Tr; ENSDART00000111033; Danio_rerio. DR Ensembl-Tr; ENSDART00000114484; Danio_rerio. DR Ensembl-Tr; ENSDART00000115283; Danio_rerio. DR ImaGenes; IMAGp998G0615262Q. DR ImaGenes; IRAKp961L13210Q. DR ImaGenes; IRBOp991C0358D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Chi-Bin Chien CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 210 Row: l Column: 13 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 49900698. XX FH Key Location/Qualifiers FH FT source 1..962 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_9" FT /clone="MGC:109981 IMAGE:7274048" FT /tissue_type="Eye, zebrafish, larval, 72 hpf pool" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..962 FT /gene="zgc:109981" FT CDS 65..763 FT /codon_start=1 FT /gene="zgc:109981" FT /product="zgc:109981 protein" FT /db_xref="GOA:Q504A5" FT /db_xref="HSSP:2BZG" FT /db_xref="InterPro:IPR008854" FT /db_xref="InterPro:IPR016822" FT /db_xref="UniProtKB/Swiss-Prot:Q504A5" FT /db_xref="ZFIN:ZDB-GENE-050522-141" FT /protein_id="AAH95104.1" FT /translation="MSAQADRVMDLSEWENRWQEGRTGFHRSDVHNLLKANVDKLICGR FT REVRFFFPLCGKAVDMKWLADMGHTVVGVEFSEKGIKEFSQEQNLEYNEEAVADIPGAK FT LFKSTDGKISIYQCDLYKFSSAVAGHFGGIWDRGALVAINPCDRQKYASLLVSLMSSDC FT RYLLDTLEYNPELYKGPPFFVSEDDIKTVFGGSCNIDLLQSVDGFEEKHRSWGLDSLTE FT KLYLLTTKTQ" XX SQ Sequence 962 BP; 304 A; 171 C; 234 G; 253 T; 0 other; aaaattcttc ctgttatgaa agcgaagtca gtcggcggac agtgaacttt acaaccattg 60 gaagatgtct gcgcaggccg accgggtgat ggatctgtcc gagtgggaga accgctggca 120 ggaaggaaga accggtttcc acagatctga tgtgcacaat ttgctgaaag ctaatgtgga 180 caaactcata tgtggacgac gggaggttcg gttcttcttc ccgctttgtg gaaaggctgt 240 agatatgaaa tggctggctg atatggggca cacggttgtt ggagttgaat tttcggaaaa 300 aggaattaaa gagttttctc aagagcaaaa tctggagtat aatgaagaag ctgtggcaga 360 tattcctgga gcaaagcttt tcaagagcac agatgggaag atctccatct atcagtgtga 420 tttatacaag ttctccagtg ctgttgcggg acactttgga gggatctggg atcgaggagc 480 actggtggct ataaacccat gtgatcggca aaagtatgcg agtctgcttg tgtctttaat 540 gagcagcgac tgcagatatc tgctggacac gctggaatat aaccctgagc tttataaagg 600 tccaccattc tttgtgtcag aagacgacat aaaaactgta ttcggaggaa gctgtaatat 660 tgatcttctg cagagtgtgg atggtttcga ggagaagcac agatcatggg gactggattc 720 actcacagag aaactttacc tgctcactac taaaactcag taatcatcac cagaccagac 780 cagcgttaca aactcatcac ttgacaacag caacaaatgc ataagggact cacaaataag 840 gatgcagaaa agatgcaatt attttccaat tttaataaca gatttttgct attttaatat 900 ttgaacatga ttgtacaata attgattaaa tcgttatatt ttgaaaaaaa aaaaaaaaaa 960 aa 962 // |
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