EBI Dbfetch

ID   BC093889; SV 1; linear; mRNA; STD; HUM; 649 BP.
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AC   BC093889;
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DT   20-APR-2005 (Rel. 83, Created)
DT   15-OCT-2008 (Rel. 97, Last updated, Version 6)
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DE   Homo sapiens fucosyltransferase 8 (alpha (1,6) fucosyltransferase), mRNA
DE   (cDNA clone IMAGE:7939734), complete cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-649
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
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RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-649
RG   NIH MGC Project
RA   ;
RT   ;
RL   Submitted (11-APR-2005) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL   MD 20892-2590, USA
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DR   ASTD; TRAN00000049674.
DR   Ensembl-Gn; ENSG00000033170; Homo_sapiens.
DR   Ensembl-Tr; ENST00000342677; Homo_sapiens.
DR   H-InvDB; HIT000334864.
DR   ImaGenes; IRCBp5005L041Q.
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CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Mike Brownstein, NIMH
CC   cDNA Library Preparation: British Columbia Cancer Research Center
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Genome Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
CC   Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
CC   Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
CC   Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
CC   Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
CC   Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
CC   Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
CC   Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
CC   Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRCB Plate: 1 Row: l Column: 4
CC   This clone has the following problem: The cds is short compared to
CC   the longest cds in the locus.
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FH   Key             Location/Qualifiers
FH
FT   source          1..649
FT                   /organism="Homo sapiens"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NIH_MGC_298"
FT                   /clone="IMAGE:7939734"
FT                   /tissue_type="Lung, PCR rescued clones"
FT                   /note="Vector: pCR4-TOPO; Clone identification sequence
FT                   tag: CATGACCC"
FT                   /db_xref="taxon:9606"
FT   gene            1..649
FT                   /gene="FUT8"
FT                   /note="synonym: MGC26465"
FT   misc_feature    1..649
FT                   /gene="FUT8"
FT                   /note="This cDNA sequence aligns to the human reference
FT                   genome (build 36) without differences"
FT   CDS             97..606
FT                   /codon_start=1
FT                   /gene="FUT8"
FT                   /product="fucosyltransferase 8 (alpha (1,6)
FT                   fucosyltransferase)"
FT                   /db_xref="GOA:Q8IUA5"
FT                   /db_xref="HGNC:4019"
FT                   /db_xref="InterPro:IPR001452"
FT                   /db_xref="UniProtKB/TrEMBL:Q8IUA5"
FT                   /protein_id="AAH93889.1"
FT                   /translation="MHRQIWHLHWTLVRYPNYEFISDNSISWSAGLHNRYTENSLRGVI
FT                   LDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAI
FT                   YAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPT
FT                   YPEAEK"
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SQ   Sequence 649 BP; 189 A; 148 C; 141 G; 171 T; 0 other;
     tgcatatggc acccagcgaa cactcatctt ggaatctcag aattggcgct atgctactgg        60
     tggatgggag actgtattta ggcctgtaag tgagacatgc acagacagat ctggcatctc       120
     cactggacac tggtcaggta ccccaattat gaatttatta gtgataactc tatttcctgg       180
     tcagctggac tgcacaatcg atacacagaa aattcacttc gtggagtgat cctggatata       240
     cattttctct ctcaggcaga cttcctagtg tgtacttttt catcccaggt ctgtcgagtt       300
     gcttatgaaa ttatgcaaac actacatcct gatgcctctg caaacttcca ttctttagat       360
     gacatctact attttggggg ccagaatgcc cacaatcaaa ttgccattta tgctcaccaa       420
     ccccgaactg cagatgaaat tcccatggaa cctggagata tcattggtgt ggctggaaat       480
     cattgggatg gctattctaa aggtgtcaac aggaaattgg gaaggacggg cctatatccc       540
     tcctacaaag ttcgagagaa gatagaaacg gtcaagtacc ccacatatcc tgaggctgag       600
     aaataaagct cagatggaag agataaacga ccaaactcag ttcgaccaa                   649
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