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EBI DbfetchID BC093489; SV 1; linear; mRNA; STD; VRT; 4996 BP. XX AC BC093489; XX DT 13-APR-2005 (Rel. 83, Created) DT 07-NOV-2006 (Rel. 89, Last updated, Version 2) XX DE Xenopus laevis hypothetical protein MGC98819, mRNA (cDNA clone MGC:98819 DE IMAGE:3400699), complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-4996 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-4996 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-4996 RA Klein S., Gerhard D.S.; RT ; RL Submitted (08-APR-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998E208299Q. DR ImaGenes; IRAKp961B14187Q. DR ImaGenes; IRBHp990G1172D. DR ImaGenes; RZPDp988C0434D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Martha Rebbert, Steven L. Klein, Ph.D. CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: National Institutes of Health Intramural CC Sequencing Center (NISC), CC Gaithersburg, Maryland; CC Web site: http://www.nisc.nih.gov/ CC Contact: nisc_mgc@nhgri.nih.gov CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., CC Young,A., Zhang,L.-H. and Green,E.D. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 187 Row: b Column: 14 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 62471416. XX FH Key Location/Qualifiers FH FT source 1..4996 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Emb3" FT /clone="MGC:98819 IMAGE:3400699" FT /tissue_type="Embryo, stage 24-25" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8355" FT gene 1..4996 FT /gene="MGC98819" FT CDS 110..1375 FT /codon_start=1 FT /gene="MGC98819" FT /product="MGC98819 protein" FT /db_xref="GOA:Q566K5" FT /db_xref="InterPro:IPR007754" FT /db_xref="UniProtKB/TrEMBL:Q566K5" FT /protein_id="AAH93489.1" FT /translation="MRLTLHKKKIAALVLVLFACAGLLHIFTRRDEREFLLTVPGPSEK FT SNPSGFQLPVGTPLQMRLTAYRNNLHQPVLNADKFSGHPELVAVVQMRGGPGSGARLRL FT LAESLRAAGPRANRRLLLVLSMEKPCPEVADAMLAIDFCRVLPIYFPYSLSFYPEEFPG FT ADPNDCPRDVSKESAIQQRCNNAEYPDSHGHYREAPFALDKHHWWWSLHFTWERLREVN FT GYGGYVVFMEEGSYLLPDWQHMLRLMQKQCKEEGCQLLSLGGTASPDPSPDPQHLEVSG FT FVAPKHRSAVGIPRELYYQLMGCLAEFCTYDDYNWDWSLQHLSASCLSHPLKVLSTRQP FT RVLNLPSPPKDSECGRTGPCSSTDDASQNLRELVRQLSGQLFPKTVTVSSRQQEIRNPP FT QIKNGGWGDIRDHALCQSYARL" XX SQ Sequence 4996 BP; 1301 A; 1110 C; 1184 G; 1401 T; 0 other; gtgtatgtga gaggttcggc ggctccggga gctgaaggaa ccagaagcac cgagagaaga 60 cgggaacccc ctccggggca gctagaaacc gataatttgt ggcccgacaa tgaggctgac 120 gctgcacaag aagaagattg ctgccttggt gctggttctg tttgcctgtg ctggtttgct 180 ccatatcttc acccgccggg atgagcgcga attcttactc acggtcccag gtcccagtga 240 gaagagtaac ccctctggct tccagttgcc cgttggcact ccgctgcaga tgagactgac 300 tgcttaccgc aacaacctgc accagccagt tctaaatgct gacaaatttt ctggtcaccc 360 tgagctggtg gcagtggtac aaatgcgggg tgggccaggg agtggtgctc gtttgcgcct 420 cctagctgaa tccctgcggg cagctgggcc ccgagcaaat cgccgcctgt tgctggtgct 480 gagtatggag aagccctgcc ctgaagttgc agatgccatg ctggccatag acttttgccg 540 ggtgctgccc atctactttc cctacagcct gagcttctac ccagaggaat ttcccggagc 600 agaccccaac gattgcccca gggatgtatc caaggagtct gccattcagc agcggtgcaa 660 caacgctgag tacccagata gccacgggca ctacagagaa gcgccatttg ctctggacaa 720 gcatcactgg tggtggagtc tccatttcac atgggagaga ctgcgagagg tgaatggcta 780 tggggggtat gtggtgttca tggaggaggg cagttacctg ctcccagact ggcaacacat 840 gctgcgcctc atgcagaaac agtgcaagga ggaagggtgc cagctgctca gccttggggg 900 cactgcaagt ccagatcctt ccccggaccc ccagcacttg gaagtgagtg gctttgtggc 960 accaaagcat cgttctgcgg tgggcatacc ccgggaactc tactaccaac tgatggggtg 1020 cctggcagaa ttctgcacct atgatgatta taactgggac tggagcctgc agcacctctc 1080 tgcctcctgc ctttcccacc cactcaaagt tctcagcacc cgtcaacctc gtgtactcaa 1140 cctgccctcc cccccaaaag acagtgaatg tggacgcacc ggaccatgtt ccagtacaga 1200 cgatgcttcc caaaatctca gggagctggt caggcagctg agtggccagc tcttcccaaa 1260 aactgtaacg gtgtccagtc ggcaacaaga aatccgcaac cccccgcaaa tcaagaatgg 1320 aggttggggg gacatcaggg accatgcttt gtgccaatct tatgccaggc tatgatgtgc 1380 cgtctctgtt cttctggatt taactgtgac caaagatcag gaataatctc aggtatataa 1440 ttgcacaaga gaccaaatgc ccccaaattg ctgcttttta tatttggctc tgccattcac 1500 ctcctttgtg ccctcaccac agtgccttat gaatggacgt agccttacag atgattctca 1560 ggagcagcac aggattttac atactttaaa gacagaaatg gattttattt catacaattg 1620 tctgtggttt tagagtaatt ttattacttc gatcaaggtg ccccccgtat ccctgtgcca 1680 gggctgtagg gcatttgtaa tgtcaggacc aaagggtata agagccaaaa ctgacagtga 1740 gacttcctct gccttatacc ctggaatgcg actgacaggc ttatgtgctc ccaaactatg 1800 tgccatactt atcctcattg cattagagcc aaaggttcag ggagttaagt gtactagggt 1860 tgcagagata aatgggtttt tttactttca aacacctagt tgttttcaga tagttcaccg 1920 gaaataatga ccttttccaa ttactttcta tattttatgt gtgaccattt ttcaccttca 1980 aaagctggtc tgggaggggg gttcgagggg ggttcatcga ccctgtaagc tgttctaaat 2040 tgatatattt cttatctttg tccctgctga gcggaatccc agagtaaaga cagctgttag 2100 aattagggat gcaccaaatt cggttcagga ttctgactct ttcagcagga gtcagatcgg 2160 ccgaatcctt ctgcccagcc gaaccaaatc ctaatttgaa tatgcaaatt aggggcgggg 2220 agggaaatca cgtgactttt tgtcacaaaa caaggaagta aaaaaagttt tccctttacc 2280 aaccttaatt tgcatacgca aattaggatt tggttcggta ttcgggcgaa tcaatcgcaa 2340 aggatttggg gttcggccga atccaaaata gtggattcgg tgcatcccta gttggaattg 2400 atacaataat tgctaatatt ccacagatgc tgctgagaaa tgtatccact aaatgttgca 2460 aaattgtaac agtttagagt ctgcacctga attactgagc tgtcagactg aaacatgaga 2520 gaccagggac attcaacttt aaactgagat attggaaaaa cggtaaaaaa taactaatgg 2580 aaaataattt taaaaaaaag cgttaacagt ctgaaaacaa ctgaaaaaag tgtgtggaag 2640 gtgaacaacc cctttataaa catgcaaaga ttgtttttag aagctgccca gagagggtca 2700 caaatggttg ctctgtgttt ctcctggtgc tgcccccccc ccaggcactt tgaggtgtag 2760 ggtaagttct tctggattct gagaagttgc ccctgtctct ccgtgttggt gctgtgtgtc 2820 atgttgctga tgtttgtacc ttgttgcctc tgatccctaa ggcacacaca gtattcggga 2880 aagttactca tttatgaagg gttgtgcttg ggccaatatc acttattagt gctgtgtcgg 2940 cagattctgc tcgtaactca gatgacactt tcttcatatc cccttggctc aagggtcacg 3000 ggctgctgtg tatgtctgtg tgtgtgtctg tgtgtgtgtc tgtgtgtgtg tctgtgtgtg 3060 tgtctgtgtg tgtgtgtctg tgtacgcacc agcacatgtc tcccttcagc tctgttggga 3120 aacttttatt tcagttcatt acgaggatat tttcatggtg ctctgggcac gtgtagtcgc 3180 ccttctcttg cagaaatctg aaacttaccg tggtgcctgt ggtctgatca aaggggaagt 3240 tgagtgctat acttacaccg atatgtctac aatttttttt tttttcacat ttgagctcag 3300 cctgaggctc tgctaaagaa gaaggaaagc tacagaggca gtttattgcc aattgattag 3360 ccacaatagt gcaagctata acactatatt ttttctgctt taccatacct aagtgaaaat 3420 ctctagaagt tctctctgtt tgtctaggat agcagctgcc atattagctt gatgtgacat 3480 cacttcctgc ctttccctgc tcactcataa ctctgggctc ggggggggaa gggagagagg 3540 agcaaactga gcatgctcaa gccctagccc tggaggttta agctgaaaac aggactgata 3600 cagaagcctg tgtgtgcaca atacaaggaa agaaatgctg tgtttctttt gacagaggaa 3660 tcagagcagc attactttgt gggtttactg gtgtatttat atagaccttt ctgataaaaa 3720 aaacgtaatt ttagcctttc cttctccttt aagaaataat gttcagcttg tttttaaatg 3780 tggtttaaat atgttaatta atgtaattac acaatgtatc cccccccacg actcatgtca 3840 ccaacctgcg ggactggtct tttgactgat ttttagggtg atgaagccac cgacagttct 3900 tgcttgggga ggggtaagtg atatctctag atctgagccc ctgtagaaaa taagttccta 3960 tgacatcatg gatgatatat aatcactata tttttgggtt agctttcctt ttaaggaatg 4020 gggtagacat gaaggctcaa tcctcttcat tatctgtata tacctatgca ctgacaggac 4080 ccactgatta actgttatat tccaagatgt gcgtgcctgg caagtaatgg gttaaaatta 4140 gggattcacc gaatccacta ttttggattc agccgaaccc ccaaatcctt ggcgaaagtt 4200 tcgaccgaat ccgaacccta atttgcatat tcaaattaga ggtgggaagg ggaaaacatt 4260 ttttacttgt tttgtgacaa aaaatcaaga catttccctc cctgtcccta atttgcatat 4320 gcaaattcgg atttggttcg gccaggcaga aggaattctg gattcggtgc atcactagtt 4380 aaaattttgc ggttgatgat gaataggtgg atttggcgca gtgatggaag tgtcccctcc 4440 cctgcaaatg tctcctaacc acaacccagt gagtctgacc caggctctca cttggaacag 4500 ctgcagaaca gtgtttgtga agcaatgcat tgtgcaaggg actttcctta aggggcaggg 4560 agaatgtgag atcttcaaga aaaaagtttg tccatggcat tcgtaacagt aacatgtaat 4620 ctcaccccct cctgtcaaga gatcatggga gttgtatttc tgaaacagtt attcactgtc 4680 caaaggccgc cccccccttt caagaacccc aaaaccctta tttattaaga atataaatac 4740 agtctctgct gaggtttatc cctttccccg accaattccc tgtaatacgt cccttttcat 4800 gtgtattgtg cttaagacaa tctatttgta atggggaggg gggtattgta tttgtgcttg 4860 gtacaaaata attggtttta cattgtatgg gggaagtata tttgttttta attattttct 4920 attaaaaaag tgtattatga gggcatcatg tgcccagaaa aaaaaaaaaa aaaaaaaaaa 4980 aaaaaaaaaa aaaaaa 4996 // |
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