EBI Dbfetch

ID   BC091709; SV 1; linear; mRNA; STD; VRT; 2074 BP.
XX
AC   BC091709;
XX
DT   09-MAR-2005 (Rel. 83, Created)
DT   07-NOV-2006 (Rel. 89, Last updated, Version 3)
XX
DE   Xenopus laevis hypothetical protein MGC84943, mRNA (cDNA clone MGC:84943
DE   IMAGE:6323358), complete cds.
XX
KW   MGC.
XX
OS   Xenopus laevis (African clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Xenopus.
XX
RN   [1]
RP   1-2074
RX   DOI; 10.1002/dvdy.10174
RX   PUBMED; 12454917.
RA   Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W.,
RA   Richardson P.;
RT   "Genetic and genomic tools for Xenopus research: The NIH Xenopus
RT   initiative";
RL   Dev. Dyn. 225(4):384-391(2002).
XX
RN   [2]
RP   1-2074
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [3]
RC   NIH-MGC Project
RP   1-2074
RA   Klein S., Gerhard D.S.;
RT   ;
RL   Submitted (07-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Xenopus Gene Collection (XGC), National
RL   Institute of Child Health and Human Development, 6100 Executive Boulevard,
RL   Room 4B01, Rockville, MD 20892-7510, USA
XX
DR   ImaGenes; IMAGp998G0713766Q.
DR   ImaGenes; IRAKp961E13163Q.
DR   ImaGenes; IRBHp990B0481D.
XX
CC   Contact: XGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Wellcome/CRC Institute
CC   cDNA Library Preparation: N. Garrett, P. LeMaire, A.M. Zorn, and
CC   J.B. Gurdon (Wellcome/CRC Institute).
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: National Institutes of Health Intramural
CC   Sequencing Center (NISC),
CC   Gaithersburg, Maryland;
CC   Web site: http://www.nisc.nih.gov/
CC   Contact: nisc_mgc@nhgri.nih.gov
CC   Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
CC   Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
CC   Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
CC   Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
CC   Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
CC   McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
CC   Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
CC   Young,A., Zhang,L.-H. and Green,E.D.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 163 Row: e Column: 13
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 60648160.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2074
FT                   /organism="Xenopus laevis"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="Wellcome CRC pSK egg"
FT                   /clone="MGC:84943 IMAGE:6323358"
FT                   /tissue_type="Egg, xenopus"
FT                   /note="Vector: pBluescriptSK-"
FT                   /db_xref="taxon:8355"
FT   gene            1..2074
FT                   /gene="MGC84943"
FT   CDS             175..1761
FT                   /codon_start=1
FT                   /gene="MGC84943"
FT                   /product="MGC84943 protein"
FT                   /db_xref="GOA:Q5BIY4"
FT                   /db_xref="InterPro:IPR006759"
FT                   /db_xref="UniProtKB/TrEMBL:Q5BIY4"
FT                   /protein_id="AAH91709.1"
FT                   /translation="MRLRNGSLLTFFCLAAFLSLSWYAAWYGDRENGGELHEKQFFDLQ
FT                   QRLYLAEQENQKRSRDLGKVLDEIKRAVEEKRNAFENHTVDEIRWKVLNMSSRLSVQFS
FT                   NIYMFLPHLQGHKDQIRPNVLYGKDRNNVSIVFGIPTVKRDKQSYLMDTLNSVFSELTA
FT                   NEKRDCVVIVFIAEVNHDYVNVLANNIKNNFPQEIESGVLEIVSPPVNYYPDLSNIKET
FT                   FGDSKERVRWRTKQNLDYSFLMLYAQPKGTYYLQLEDDIVAKPQFFQYLKNFATQQTSN
FT                   DWMILEFSQLGFIGKMFRSKDLPLLAEFFLMFYKDKPIDWLLDHYLWVKVCNPEKDAKH
FT                   CDRQKSNLRIRYRPSLFQHIGIHSSLSGKIQNLKDKDFEKKLLYKAHPNPPAKVSTSLK
FT                   IYQQYDLEKAYVGQECFWAFSPVAGDFILFEFAEPFPVKGYLFKSGNIEHPGDKLFNTT
FT                   VEVLQAKNISKDTAEFPRSEDGYLQIGKFVSGVAEGVISPSIGKIKAVRLKILSESPVW
FT                   ALLSEIFIKMD"
XX
SQ   Sequence 2074 BP; 660 A; 387 C; 444 G; 583 T; 0 other;
     atcgaattcc ccgggcttga aacgggctca aggggaaaca agagacagaa gtgcaaagtc        60
     tgacagggac gactgtctca agtgacgccc cagcaacaag gggagagagt tcggctgctc       120
     agcgcagaca agtgccgggc tcggtgtatg ggagctggcc gggagctatg tgcgatgagg       180
     ctcaggaatg gcagtctgct gactttcttc tgcttagctg ctttcctctc tctgtcctgg       240
     tacgcggcgt ggtacggaga tagagaaaat ggaggagaat tgcacgaaaa acaatttttt       300
     gatctccagc aaaggctgta tctggcagag caagagaacc agaagaggtc tcgggacttg       360
     ggtaaggtcc ttgatgaaat taaacgagct gtagaagaaa agaggaatgc ttttgagaat       420
     cacacagttg atgagatacg atggaaggtt ttgaacatgt ccagcagact ttctgtgcaa       480
     ttttcaaaca tttatatgtt cctgcctcat ctacaagggc ataaagacca gattcgccct       540
     aatgtgctct atggaaaaga tagaaataat gtttccattg tgtttggcat acccacagtg       600
     aagcgagaca aacagagcta cttgatggat actttgaatt cagttttctc agagctgact       660
     gcaaatgaaa agagagattg cgttgtgatt gtttttatag cggaggtgaa ccacgactat       720
     gtcaatgtct tggctaataa tataaaaaat aattttcctc aagagataga atctggcgtc       780
     cttgagattg tctctcctcc tgtgaactat taccctgatt tatccaatat caaggaaacc       840
     tttggtgact ccaaagaaag agtaaggtgg agaacaaagc agaacttgga ctacagtttc       900
     ctcatgctat atgctcagcc aaagggaact tattatttac agttagaaga tgatatcgtc       960
     gcaaaacctc agttttttca gtatctcaaa aactttgcca ctcagcagac ttctaatgat      1020
     tggatgatac ttgaattctc tcagcttggt tttattggta agatgttccg atccaaagat      1080
     ctgcccttac tagccgagtt ctttctaatg ttttacaaag ataaacctat agactggctt      1140
     cttgatcatt atctttgggt caaagtatgc aatcctgaaa aagatgctaa acactgtgat      1200
     cgccaaaagt caaacctacg aattcgatat cgtccatccc tgtttcagca cataggtatt      1260
     cactcctctc tctcaggaaa aatccagaac ctaaaggata aagattttga aaaaaaattg      1320
     ctttacaaag ctcatccaaa cccaccagca aaagtgagca caagccttaa gatttatcag      1380
     cagtacgacc ttgagaaagc ctatgtgggc caggaatgct tctgggcctt ctctcctgtg      1440
     gctggcgatt ttattttgtt tgaatttgca gaacctttcc cagtaaaagg gtacctgttt      1500
     aaaagtggga atatagaaca ccctggcgat aaacttttca acaccacagt tgaagtttta      1560
     caggcgaaga acattagcaa agacacagct gagtttccaa gaagtgaaga tggctattta      1620
     cagataggca agtttgtcag tggagtagct gagggagtta taagcccatc aataggaaaa      1680
     atcaaagccg ttcgtttaaa gattctctca gaatctccag tgtgggcgtt gctcagtgag      1740
     atcttcatca agatggatta aaggaagcta ttactactgc ataaaagatt tgaaaaaaag      1800
     tttttacaca ctggggctgt gaaagctaat tcatggacca tatactcttt caccaccaaa      1860
     ataatgaagg aaaggataca acgtttctat ttttatgctt aaaatacttt atttataaat      1920
     gattaaatta agataatttt tctttaaggt ggcattttta cagtttttgt tggaatattt      1980
     ttcaaaaccg actgtacaat gggaccaaag atcagacaag tctgacagaa ttttaaaatt      2040
     tacttttttt ttaattgaaa aaaaaaaaaa aaaa                                  2074
//