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EBI Dbfetch

ID   BC091602; SV 1; linear; mRNA; STD; VRT; 1422 BP.
XX
AC   BC091602;
XX
DT   08-MAR-2005 (Rel. 83, Created)
DT   24-MAR-2006 (Rel. 87, Last updated, Version 4)
XX
DE   Xenopus tropicalis cytochrome b5 reductase b5R.2, mRNA (cDNA clone
DE   MGC:97647 IMAGE:6980390), complete cds.
XX
KW   MGC.
XX
OS   Xenopus (Silurana) tropicalis (western clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Silurana.
XX
RN   [1]
RP   1-1422
RX   DOI; 10.1002/dvdy.10174
RX   PUBMED; 12454917.
RA   Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W.,
RA   Richardson P.;
RT   "Genetic and genomic tools for Xenopus research: The NIH Xenopus
RT   initiative";
RL   Dev. Dyn. 225(4):384-391(2002).
XX
RN   [2]
RP   1-1422
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [3]
RC   NIH-MGC Project
RP   1-1422
RA   Klein S., Gerhard D.S.;
RT   ;
RL   Submitted (01-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Xenopus Gene Collection (XGC), National
RL   Institute of Child Health and Human Development, 6100 Executive Boulevard,
RL   Room 4B01, Rockville, MD 20892-7510, USA
XX
DR   ImaGenes; IMAGp998O1314639Q.
DR   ImaGenes; IRAKp961F12204Q.
DR   ImaGenes; IRBNp992E0423D.
XX
CC   Contact: XGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Robert M. Grainger
CC   cDNA Library Preparation: Life Technologies, Inc.
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Sequencing Group at the Stanford Human Genome
CC   Center, Stanford University School of Medicine, Stanford, CA  94305
CC   Web site:       http://www-shgc.stanford.edu
CC   Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
CC   Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
CC   R. M.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 204 Row: f Column: 12
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 60552288.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1422
FT                   /organism="Xenopus (Silurana) tropicalis"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NICHD_XGC_Emb7"
FT                   /clone="MGC:97647 IMAGE:6980390"
FT                   /tissue_type="Embryo, Silurana tropicalis, tailbud (stages
FT                   20-27)"
FT                   /note="Vector: pCMV-SPORT6.1"
FT                   /db_xref="taxon:8364"
FT   gene            1..1422
FT                   /gene="MGC97647"
FT   CDS             10..924
FT                   /codon_start=1
FT                   /gene="MGC97647"
FT                   /product="cytochrome b5 reductase b5R.2"
FT                   /db_xref="GOA:Q5BJ68"
FT                   /db_xref="InterPro:IPR001709"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5BJ68"
FT                   /protein_id="AAH91602.1"
FT                   /translation="MEISTDSNMLVALAVIGVTVLLFLIKALGSQAKKAPLTLLDPNAK
FT                   YPLPLIEKQEISHDTKKFRFGLPSQEHVLGLPVGQHVYLSAKINGSLVVRAYTPVSSDE
FT                   VKGHVDLIVKVYYKNVHPKFPEGGKMSQHLDSLKIGETIDFRGPNGLLVYKEKGKFAIR
FT                   PDKKSEPKLKVAKHVGMLAGGTGITPMLQLIRQITQDPNDNTKCSLIFANQTEDDILLR
FT                   YELETVAKSHPEQFKLWYTLDRPPQGWKYGAGFVTADMIKEHLPPPSEDVVVLMCGPPP
FT                   MIQFACQDNLTKLGYPEAGRFAY"
XX
SQ   Sequence 1422 BP; 414 A; 346 C; 334 G; 328 T; 0 other;
     ggagcagtca tggagatttc cacagactct aacatgctgg tagccctggc agtaatcggg        60
     gtaactgtgt tactgttcct gattaaagcg ctgggatctc aggctaagaa agcgccgctc       120
     actctgctgg accccaatgc caagtaccca ctacctctca tagagaaaca ggaaatcagc       180
     cacgacacca agaaattcag gtttgggctc ccctcgcaag agcatgtctt ggggctccct       240
     gtaggtcagc atgtttacct ctctgccaag atcaatggga gcctggtcgt tcgggcgtat       300
     acgccggtgt ctagtgatga agtcaagggc cacgtggatc tgatagtgaa ggtatattac       360
     aaaaacgttc atcccaaatt cccagaggga ggcaaaatgt cccaacacct ggacagtctt       420
     aaaatagggg aaacaattga tttccggggt ccaaatgggc ttcttgtcta caaagagaag       480
     ggtaagtttg ccatcaggcc agataagaag tccgaaccaa agcttaaggt ggccaaacat       540
     gtcggaatgc ttgccggagg aactggtatt acacccatgt tacagctgat ccggcagatc       600
     acccaggatc ccaatgataa tacaaaatgc tccctcatat ttgctaacca gacagaagac       660
     gacattttgc tgcgttatga actggaaact gtagccaaga gccacccgga gcagtttaag       720
     ctgtggtata cactggatcg gcccccgcaa ggctggaagt acggcgctgg ctttgtcacc       780
     gcagacatga ttaaagagca cctaccgccc ccatccgagg atgtcgttgt gctgatgtgc       840
     gggcctcctc ccatgatcca gtttgcgtgc caggacaacc tgaccaagct tgggtacccc       900
     gaggccggaa ggtttgccta ctagcataga aatgacgcca gagccgtcgg tgccaaggga       960
     tgccgccaag ctgccaccaa tgccatggat acacggatgt tttaccaagg agatatcagt      1020
     acagctgggg tatcccgtaa cattccaatg ctcaggttct gccccagtgg tgccccaagg      1080
     gccgtgccaa gaccattcct gttctgttcc ctctgggctc tgccctctac tctgctggga      1140
     actttcctaa ttctcacgca actcagtggg tctttctatt atctcaccgg aatctggatg      1200
     cacaagagca ttctgggatt gttttaaccc attcctggga tctgatgtct gtctcatatt      1260
     aaggactctc agtcttctgt gtggattttg ttttaataga gagatacaga atctgccagt      1320
     gtttaataaa tatgagccta cgtctacttt taaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1380
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa                         1422
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