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EBI DbfetchID BC091231; SV 1; linear; mRNA; STD; ROD; 1299 BP. XX AC BC091231; XX DT 11-MAR-2005 (Rel. 83, Created) DT 07-JAN-2006 (Rel. 86, Last updated, Version 5) XX DE Rattus norvegicus agmatine ureohydrolase (agmatinase), mRNA (cDNA clone DE IMAGE:7322415), partial cds. XX KW . XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-1299 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1299 RG NIH MGC Project RA ; RT ; RL Submitted (01-MAR-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000005511. DR Ensembl-Gn; ENSRNOG00000012315; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000016648; Rattus_norvegicus. DR ImaGenes; IMAGp998N1315387Q. DR ImaGenes; IRAKp961B11215Q. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Drs. Josef Lazar & Howard Jacob, Medical CC College of Wisconsin CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 215 Row: b Column: 11 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Similarity but not CC identity to protein. XX FH Key Location/Qualifiers FH FT source 1..1299 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_247" FT /clone="IMAGE:7322415" FT /tissue_type="Liver, rat" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene <1..1299 FT /gene="Agmat" FT CDS <1..1060 FT /codon_start=2 FT /gene="Agmat" FT /product="Agmat protein" FT /db_xref="GOA:Q0D2L3" FT /db_xref="InterPro:IPR006035" FT /db_xref="UniProtKB/Swiss-Prot:Q0D2L3" FT /protein_id="AAH91231.1" FT /translation="LQLLKSSWVRSAGSGVVTWRASAGLFCPGTRQASDTSDTLHHPSP FT SSESQVQPVRVCSMMHLPLQSSPEGLDAAFVGVPLDTGTSNRPGARFGPRRIREESLML FT GTVNPSTGALPFQSLRVADLGNVNVNLYNLQDSCRLIREAYQNILATGCIPLTLGGDHT FT ITYPILQAVAKEHGPVGLVHVGAHSNTSDKPLEDKVYHRTPFRRSVDEGLLDSKRVVQI FT GIRGSSRTLDPYRYSRSQGFRVVLAEDCWMKSLVPLMAEIRQQMGGVPLYISFAIDALD FT PAYAPGTGTPEIAGLTPSQALEIIRGCQGLNVVGCDLVEVSPPYDLSGNTALLAANLLF FT EMLCALPKVTTV" XX SQ Sequence 1299 BP; 309 A; 363 C; 347 G; 280 T; 0 other; gctgcagctg ctgaagtcca gctgggtccg gagtgcgggg tctggggtgg tcacgtggcg 60 tgcctctgcg gggctcttct gtcctgggac ccgccaggct tcagatacct cagataccct 120 acatcacccg tcccctagct ctgagtcaca ggtacagccg gtacgcgtct gttccatgat 180 gcacttgccc ctgcagtcct cccccgaggg gctggatgct gctttcgtcg gtgtgcctct 240 ggataccgga acttccaacc ggcccggggc aagatttgga ccccgtcgca tccgggagga 300 gtcactgatg ctggggactg tcaatcccag cacgggagcc ctccccttcc agtccctcag 360 ggttgcagac ctaggcaatg tgaacgtcaa tctctacaac cttcaggaca gctgccggct 420 aatccgagag gcctatcaga acatcctagc aactggctgc attcctctga ccttgggtgg 480 agaccatacc atcacatatc ccatactgca agccgtggca aaagagcatg gccctgtggg 540 tttagtgcat gtgggtgccc acagcaacac ctcggacaaa cctctggagg acaaggtcta 600 ccatcggaca cctttccgcc gaagtgtgga tgagggactg ctggacagca agcgagtggt 660 acagataggt atccggggct cctccaggac cctggatccc tacagataca gtcggagcca 720 gggcttccgt gtggtcctgg ctgaagactg ttggatgaag tcactggtcc ccctgatggc 780 agagatcagg cagcagatgg ggggtgtgcc tctttacatc agctttgcca tagatgcctt 840 ggatcctgcc tatgccccag ggacagggac accagaaatt gctgggctca cccctagtca 900 ggctctggag atcatccggg gctgtcaagg cctgaatgtg gtgggctgtg accttgtgga 960 agtttccccg ccgtatgatc tctctggaaa cacagccctc ctcgcggcta acctactgtt 1020 tgagatgctg tgtgctctcc ccaaggtgac aactgtctga gtcagtgttc ctgaagttga 1080 aacagactgg gtcatgatga agcctcaagg ccctgtgaac gaactgtggc taggatcaaa 1140 gaacccctcc tgtgaggtgt caccacaaac aagggcaatt cagagcatta ccccgaacag 1200 ctcgaacagc tcgtgtctct ttccttccta acattaaaac atttatttaa tttaaaaaaa 1260 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa 1299 // |
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