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EBI DbfetchID BC091059; SV 1; linear; mRNA; STD; VRT; 1828 BP. XX AC BC091059; XX DT 08-MAR-2005 (Rel. 83, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 4) XX DE Xenopus tropicalis MGC108323 protein, mRNA (cDNA clone MGC:108323 DE IMAGE:7022226), complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-1828 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1828 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1828 RA Klein S., Gerhard D.S.; RT ; RL Submitted (01-MAR-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998B1614748Q. DR ImaGenes; IRAKp961F15213Q. DR ImaGenes; IRBNp992D0628D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Rob Granger, University of Virginia CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 213 Row: f Column: 15 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 60551300. XX FH Key Location/Qualifiers FH FT source 1..1828 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Swb1N" FT /clone="MGC:108323 IMAGE:7022226" FT /tissue_type="Whole body, male, 10 months old, strain F6, FT normal" FT /note="Vector: pExpress1" FT /db_xref="taxon:8364" FT gene 1..1828 FT /gene="MGC108323" FT CDS 431..1558 FT /codon_start=1 FT /gene="MGC108323" FT /product="MGC108323 protein" FT /db_xref="GOA:Q5BKI7" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q5BKI7" FT /protein_id="AAH91059.1" FT /translation="MLKVGPRMFQYFIKVIVQAFQLFYILLKIDPLSYIILQNPPGLPS FT IAVTWLFCVLRRSQLIIDWHNYGYSIMSLTNGPKHPIVRIAKWYEKVFGRLSDYNFCVT FT NAMKEDLMVNWNIKAATLYDKPASIFQETPIEMQHKLFMKLAKEYPPFKYPSQSKCSGT FT EKTAFTELKLEKGTISFNKECPALLISSTSWTEDEDFSILLKALEEYELFIRNGAKLPP FT LVCVITGKGPLKEHYSKLIREMQFKNIQICTPWLEAEDYPLLLGSANLGVCLHKSSSGL FT DLPMKVVDMFGCCLPVCAINFKCLQELVKHGENGLIFKDSLELAEQLKDMFTDFTSKSS FT KLKRFQQNLRESVQTRWDETWDQIVLPVITENYKT" XX SQ Sequence 1828 BP; 588 A; 326 C; 379 G; 535 T; 0 other; cgcaaagcaa caaaaatggc gtgcttaagg aagcccatat tgcttgcagt agctttgttc 60 tttggcaccg tgactttatg tggtgctagg tttatatatt gctttctagt tcttcctctg 120 ttacttgcgc tattgcttgc ttggactgat gatccgaaag gtaacaagcg gatatgtgtg 180 ctagttcttg gagacatcgg ccgtagccca cggatgacgt atcacgcgct gtcattggct 240 cgccatggtt tttttgtgac gcttacaggc ttccgtgtag gtccttccaa cggacacgag 300 ggcacccact ccgtttagaa gaagggaggt tccatttaaa cattcggaaa ggatttttta 360 caaaactgaa ccccatagag atctcttaca tcatgaaaga ataaatattc agccggtttc 420 tgaatttaga atgcttaaag ttggtccacg gatgtttcag tactttatta aggtgattgt 480 gcaggctttt cagctttttt acatattact caagattgat cccctttctt atatcattct 540 tcagaatcca ccaggcttgc ctagtattgc agttacgtgg ttgttttgtg ttctgagaag 600 gagccagctc ataattgact ggcataacta tggctattca atcatgagcc tgacaaatgg 660 accaaagcat ccaattgtgc gaattgcaaa atggtatgaa aaagtgtttg gacgtctgtc 720 tgactacaac ttttgtgtaa caaacgcaat gaaggaggac ttaatggtca actggaacat 780 caaagctgct actctctatg ataagcctgc ctcaattttt caagaaactc caattgaaat 840 gcagcacaag ttattcatga aacttgcaaa ggagtatccg ccattcaaat atccgtcaca 900 atcgaaatgc tcaggcactg aaaaaactgc ttttacggaa ttaaaactgg aaaaaggcac 960 cattagcttc aataaggaat gccctgcatt attaatcagt agtacaagct ggacagagga 1020 tgaagacttt tcaatattac tgaaagcact ggaagagtat gaattgttta ttagaaatgg 1080 agctaaactt ccaccacttg tatgtgttat aacaggaaag gggcctttaa aagaacacta 1140 cagcaagcta attagagaga tgcagttcaa gaacatccag atttgcacac catggttgga 1200 ggcagaagat tatcctcttt tattgggatc tgctaatctg ggagtgtgtc tccataaatc 1260 atccagtggt ctggaccttc ctatgaaagt ggtggatatg ttcggttgct gtcttcctgt 1320 ttgtgcaatt aattttaaat gtttacaaga actcgtaaaa catggagaaa acggtttaat 1380 attcaaagat tcactagagc ttgcggaaca attaaaggat atgtttacag attttacaag 1440 taagtcaagc aaattgaaaa gatttcaaca aaatcttcga gaatctgtac aaacacgatg 1500 ggatgaaacc tgggatcaga ttgttctacc agtaattaca gaaaactata agacataaat 1560 gcagcattac atagaacttc ttctcttcct ttatgtgttg ctgtaagact gcatgccaaa 1620 atgtaaaatt ggaaagaaca gaaaaacctg ctcagttaaa aaaagtgaaa attgtaggtc 1680 tcggtttttt atggtaaagg ggcaggcaat acagtgaagt gagagatttg atgaattgtt 1740 actggtcatg tgcataaatg gatggcaatt taataaactt ggaacaaact ttctgtacta 1800 aaaaaaaaaa aaaaaaaaaa aaaaaaaa 1828 // |
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