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EBI DbfetchID BC091035; SV 1; linear; mRNA; STD; VRT; 1445 BP. XX AC BC091035; XX DT 08-MAR-2005 (Rel. 83, Created) DT 15-APR-2006 (Rel. 87, Last updated, Version 4) XX DE Xenopus tropicalis hpd protein, mRNA (cDNA clone MGC:107914 IMAGE:7024220), DE complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-1445 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1445 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1445 RA Klein S., Gerhard D.S.; RT ; RL Submitted (01-MAR-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998E1814753Q. DR ImaGenes; IRAKp961L22213Q. DR ImaGenes; IRBNp992A0329D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Rob Granger, University of Virginia CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 213 Row: l Column: 22 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 60552038. XX FH Key Location/Qualifiers FH FT source 1..1445 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Swb1N" FT /clone="MGC:107914 IMAGE:7024220" FT /tissue_type="Whole body, male, 10 months old, strain F6, FT normal" FT /note="Vector: pExpress1" FT /db_xref="taxon:8364" FT gene 1..1445 FT /gene="hpd" FT /note="synonym: MGC107914" FT CDS 56..1240 FT /codon_start=1 FT /gene="hpd" FT /product="hpd protein" FT /db_xref="GOA:Q5BKL0" FT /db_xref="InterPro:IPR004360" FT /db_xref="UniProtKB/Swiss-Prot:Q5BKL0" FT /protein_id="AAH91035.1" FT /translation="MTSYTDKGEKHARGRFLSFHHLTFWVGNAKQAASFYCDKFGFEPC FT AYKGLETGSRDVVSHAIKQDKIIFVFQSPLNPGNQEMGQHMIKHGDGVKDVAFQVEDCD FT FLFQKAKDHGAVVVREPWIEEDEGGKVKYAVLQTYGDTTHTLLEYLGPYRGVFLPGYKE FT PLFRDPLLPTLPSGCLSFIDHIVGNQPDNEMVPIVEWYQKCLLFHRFWSVDDKQIHTEY FT SSLRSIVVTNYEETIKMPINEPAAGKKKSQIQEYVDYYGSAGVQHIALNTSNIIKAVKN FT LKSRGIEFLSAPDTYYEELRKKLKTAKITVKEDLNVLQELKILVDYDDKGYLLQIFTKP FT MQDRPTLFLEVIQRYNHFGFGAGNFKSLFEAIETDQDARGNLTIYAANGEHQVL" XX SQ Sequence 1445 BP; 472 A; 269 C; 336 G; 368 T; 0 other; tttctaacaa acacaggata ctgtacaggt tttggagctc tggctgtttg acatcatgac 60 atcctataca gataaagggg agaagcacgc aaggggccgc ttcctgagct tccaccacct 120 aaccttctgg gtgggaaatg ccaaacaggc ggcgtcattc tattgtgaca agtttgggtt 180 cgagccttgt gcttataaag gtttggaaac tggaagcaga gacgtggttt ctcatgccat 240 taaacaagat aagattattt ttgtcttcca gtctcctcta aatcctggaa atcaagagat 300 ggggcagcat atgatcaaac acggtgatgg cgtgaaggat gttgctttcc aggtggaaga 360 ctgtgacttt ttatttcaga aagccaaaga tcatggtgct gttgttgtga gagagccttg 420 gattgaggaa gatgaaggtg gcaaggtgaa atatgcagtc ctgcaaactt acggcgatac 480 tacacatact ctgctagaat acctggggcc atatcggggt gtctttctac caggttataa 540 agagccgctg ttcagagatc ctctgttacc tacactgcca tcaggctgtc tcagtttcat 600 tgaccacatt gttgggaacc agccagataa tgagatggtg cctatcgtag agtggtatca 660 gaagtgcctg ctgttccaca gattctggtc ggttgatgac aaacagatac acactgagta 720 cagctccctg agatccatag tggtgacaaa ctatgaggaa actattaaaa tgcccataaa 780 tgaaccagct gccggaaaga aaaaatctca gatacaggaa tatgttgact attacggcag 840 cgctggggta cagcacattg ctctgaacac ttccaacatc attaaagcag tgaaaaatct 900 gaaatctcgt gggattgagt ttctctctgc ccctgatact tattatgaag aactgaggaa 960 aaaactgaaa actgccaaga ttactgtgaa ggaagatctc aatgtattac aggaactaaa 1020 aatcctggtt gattacgatg ataagggtta ccttctccag atcttcacca aaccaatgca 1080 ggacaggccc accctcttcc tggaggttat tcagcgatac aatcattttg gttttggagc 1140 tggtaacttc aagtcattgt ttgaggccat tgagaccgat caagatgcca gaggaaatct 1200 gactatctat gcagccaatg gagaacatca agttttataa taataataat ttaggcatgg 1260 aagtaggggg aatgtattaa gaagcaggtc acttgaggtg aatcacggga aaaggcagaa 1320 gaattaataa agttctagtt aggataaggc acaacatggc aagaaagcta agctcatttt 1380 gatgcaaaat agtaaataaa tagaaatatg aaaaaagaaa aaaaaaaaaa aaaaaaaaaa 1440 aaaaa 1445 // |
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