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EBI DbfetchID BC089743; SV 1; linear; mRNA; STD; VRT; 2671 BP. XX AC BC089743; XX DT 16-FEB-2005 (Rel. 82, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 4) XX DE Xenopus tropicalis MGC108402 protein, mRNA (cDNA clone MGC:108402 DE IMAGE:7024353), complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-2671 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-2671 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-2671 RA Klein S., Gerhard D.S.; RT ; RL Submitted (01-FEB-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998K0714753Q. DR ImaGenes; IRAKp961K16213Q. DR ImaGenes; IRBNp992C1029D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Rob Granger, University of Virginia CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 213 Row: k Column: 16. XX FH Key Location/Qualifiers FH FT source 1..2671 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Swb1N" FT /clone="MGC:108402 IMAGE:7024353" FT /tissue_type="Whole body, male, 10 months old, strain F6, FT normal" FT /note="Vector: pExpress1" FT /db_xref="taxon:8364" FT gene 1..2671 FT /gene="MGC108402" FT CDS 16..327 FT /codon_start=1 FT /gene="MGC108402" FT /product="MGC108402 protein" FT /db_xref="GOA:Q5EBE1" FT /db_xref="InterPro:IPR017968" FT /db_xref="UniProtKB/Swiss-Prot:Q5EBE1" FT /protein_id="AAH89743.1" FT /translation="MANLAKATGKLKSVDYEVFGRVQGVCFRMYTEDEARKLGVVGWVK FT NTRQGTVTGQVQGPEDKVNSMKAWLSRVGSPSSRIDRIDFNDEKEITKLQYNGFSTRY" XX SQ Sequence 2671 BP; 857 A; 504 C; 496 G; 814 T; 0 other; cttgcttatt tagccatggc taacctggcc aaagccacag gcaaactgaa atcagttgat 60 tatgaagttt ttggccgtgt ccagggtgtt tgcttcagaa tgtatactga agatgaagct 120 agaaaactcg gagtggttgg ctgggttaaa aatacaagac aaggcacagt gacgggacaa 180 gtccagggac cagaggacaa agtaaattca atgaaagcat ggctgagcag agtgggcagt 240 ccaagctcaa ggatcgaccg gatcgacttt aatgatgaga aagaaatcac taagctccag 300 tataacgggt tcagcaccag atactgaaat ggggaaactt acgagtatat gttttaattt 360 aatgcagtgg tgtccattct gcatcactac agcagcagca acaaccatta gcagctggtt 420 aggctgccat ataatgctaa gagagaacac agattggaca tccctgataa ctacaaagca 480 aatgtagggg catatttgat aaagggcaag ttttcggttt gtctaaagcc accaaaattt 540 gcttcactac gttagacatc ttttcacaaa attgcatatt tacttgacat ctcaagtacc 600 ctgttgcaaa cgtgttgtgc tgaaattttg ctggcgtaaa tccttggcaa aaattcactt 660 cagtattttc ccacatacaa ttgatagttc gcctgcctga atctggtaac cttcctaaat 720 gggcaaatat tcaatgtttc gaactggtta aatttcaact gccatctggc aaatgttgga 780 caatgggaag ttgatttgct aacactcgtc tttttatttg gctgatattg tggcgaattt 840 catttttggt gaaaatactc caaatttttt ctccctttag gaaatatgcc ccataatatc 900 tttgttatat gaaataaatc accatgactt aaaaatgtat gtaaagcaat tatctaacca 960 gccaaggata ctgtatgtat cattaatcag atttacaaaa cagctctatt cctcagatat 1020 atatatataa tataaccctt gtggtttatt ttacttttct aataatgcag catgttaaaa 1080 ctttctttct gtgtgcagct tgcattcata tagactgtaa gtgcaggtct agtacgacgc 1140 caatagcaac aactgactct aggggaatca gatgggtcaa gatgatgaaa ggggagatgg 1200 tgcaaaaata gctgctttac agcttattga agtcaaccat actcttgcat tggaagcctt 1260 accacaaaat tacattaggt gcacaaattg ctgttcccca gtaaaataaa acaaaagaag 1320 gcagtgaata caatattttg gcaattaaaa ctccatacag aaacatctag agccatggat 1380 ggggggtcaa gaagtccacc taaacattat tagagttaca agcaagactg tttgatttgc 1440 aaaatcccag aaacaacaac ttgacccttg acaaatcacc taatctcttt gtgactcgtg 1500 actccttgct tttaaaggac atgcaaaccc cacacaaaaa aatttaatca gtgaacagtc 1560 tctttgaatt ctttaaatac ctgccactct ggttgttgaa aggttgcaac atccccttaa 1620 taactttgga ttcctttccc tcctgtaacc cccttgttcc cctccctcag gaatttactt 1680 tggctcttgg ctaactgagc atgctcaatt ctattcaact catgttacta aacgcatgct 1740 ccagtatagc agccaatgaa gagatagcaa tgctgaaatt ctgctttagc tgtgcactct 1800 gctggagaaa catgtttttt tttaacctcc tctgctgtgc tctgcttaat cattacagtg 1860 ctttttttta tcaaagtaag ttctgcctgt gtaagcctgc attcttcatt gcatgacctt 1920 tacagcacac atatgctgtt tgcagatgta gatttcacta gatgtgtaag agggaaaata 1980 gcccctggct gctgctattt gtgttagaaa aatgtgatgg aggggatata tgcaatacaa 2040 atagtgtggt ttgggtgggg gagaatttgc caacttatat acataggaaa atgtagggtt 2100 tacatgtcct ttaaagccac aagtagcata atttatctat agaactacct cctttctctt 2160 tacagtatct ttgactgggc caaacactat tttcaatgca gtcacaaggc aaattcaata 2220 taaatcctat ttaccctgta actagttttt tatttttttc attgaatcca gacaattaac 2280 tgatgtaagt cactaagccc agttgttggt atctgtagaa gtgatataat ctgcttaaat 2340 tacattaaca ttattataag aagtggacag agtaataatt tctttctgag attgaaccag 2400 taaaagactt atgattggtt ctgaacaaga tccaaggctc aaagatgaaa gcatgaattc 2460 caaaaatgcc tgagaaaaat atgatcacat tcttagacat acagtttaaa ggtctgctag 2520 gcaaaggggc atgtcaactt cttacccagg ttcttggaaa tgaaaaataa cataattctc 2580 tgtattattt gctttgtttt tctagcatgt atgtcttttt taataaattg tgccatcact 2640 gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a 2671 // |
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