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EBI DbfetchID BC089631; SV 1; linear; mRNA; STD; VRT; 1418 BP. XX AC BC089631; XX DT 03-FEB-2005 (Rel. 82, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 4) XX DE Xenopus tropicalis MGC107801 protein, mRNA (cDNA clone MGC:107801 DE IMAGE:7021045), complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-1418 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1418 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1418 RA Klein S., Gerhard D.S.; RT ; RL Submitted (01-FEB-2005) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998A1114745Q. DR ImaGenes; IRAKp961B13213Q. DR ImaGenes; IRBNp992G0227D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Rob Granger, University of Virginia CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 213 Row: b Column: 13 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 58476766. XX FH Key Location/Qualifiers FH FT source 1..1418 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Swb1N" FT /clone="MGC:107801 IMAGE:7021045" FT /tissue_type="Whole body, male, 10 months old, strain F6, FT normal" FT /note="Vector: pExpress1" FT /db_xref="taxon:8364" FT gene 1..1418 FT /gene="MGC107801" FT CDS 31..885 FT /codon_start=1 FT /gene="MGC107801" FT /product="MGC107801 protein" FT /db_xref="GOA:Q5FW48" FT /db_xref="InterPro:IPR002811" FT /db_xref="InterPro:IPR005106" FT /db_xref="InterPro:IPR011182" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q5FW48" FT /protein_id="AAH89631.1" FT /translation="MSEERRMRIGVVGYGHIGKYLVDKIVREGANHSMELAFVWNRRRE FT KLSGAVDPRLQLQDLSDCQKWAADLIVEVAHPCITREYGEKFLSVAHFLVGSPTALADT FT VTEAKLRERARLSGNTLYVPCGALWGAEDIFKMAERGTLKALRITMTKHPNSFKLEGDL FT VQKNQEAMSNRTVLYEGPVRGLCPLAPNNVNTMAAACMAAHTLGFDGVVGVLVSDPSVP FT DWHFVDIEVTGGTIEKTGQVFSVKTSRRNPAAPCSVTGSATFASFWSSLLACKGHGGRV FT YIC" XX SQ Sequence 1418 BP; 417 A; 304 C; 345 G; 352 T; 0 other; gaaaagcccc attggctcct gtagcgaaaa atgtcggaag aaagaagaat gcggattgga 60 gttgtgggat acggacatat agggaagtat ctggtagata aaatagtgag agaaggggca 120 aatcattcca tggaacttgc atttgtttgg aaccggagga gggaaaagct cagcggggcg 180 gtggatcccc gtctgcaact tcaggatctc tccgactgtc agaaatgggc agcggatctg 240 attgtagaag ttgcccaccc ttgcataacc cgggaatatg gggagaaatt cctttctgtg 300 gcacattttc tggttgggtc tcccactgcc ctcgcagata cagtcactga agcaaagctg 360 agggaacggg cgaggctctc ggggaacacc ctgtatgttc cttgtggtgc attgtgggga 420 gcagaagaca tctttaaaat ggcagaacga ggtactctga aggctctcag aattactatg 480 acaaagcacc caaacagttt caagctggaa ggggatttgg tgcagaagaa ccaagaagcc 540 atgagtaacc ggaccgttct gtacgagggc cccgtgcgcg gattgtgccc cttggcgccc 600 aataatgtca atacaatggc cgctgcctgc atggctgctc atacgctggg gtttgatggg 660 gtggttggag tcctggtgtc tgacccaagc gttccagact ggcattttgt ggacattgaa 720 gtcaccggag gaaccattga gaaaacggga caagtgttca gtgtgaagac cagtaggcgc 780 aaccccgcgg cgccatgttc tgtcactggc agcgccacct tcgcctcatt ctggagcagc 840 cttctggctt gcaaaggcca cggaggaaga gtttatatct gctgacggga ctcatttact 900 gcttgtacaa tatcaaatga agcatttgta tcaatggagt ttaacgtact ttttaaaagg 960 caaaacatac aataaatgta gggaacccat agatacatgc cccccaagca ccccaaacct 1020 ggggcaatga cagtagcaac ttgttgccat acagacaccc ctttacctgt gaaatccccc 1080 cacaaaccat ttttcttatt tttccacatt gaggcatttg ggccatcact gacttcctac 1140 atgaagaatt ctctatgcat tttttataga attcaagttt ttgtaacttt cctaaaaaat 1200 taagggaaaa aaattaccaa aatgtatttt tttcctttaa gataaagcag tgaaatggtg 1260 atttgtatca gccccgggcg tctcctgaat gaaacaatac tcacaggtaa aggtgtggtc 1320 accagataag atcaaaaact catttcaagg cttattttaa agggatatcc caataaaagt 1380 ttatttcttc tttaaaaaaa aaaaaaaaaa aaaaaaaa 1418 // |
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